Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 41.31 | 73.46 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 72.46 | 73.02 |
| Zm00001d052917_P001 | Maize | cytosol | 7.34 | 69.51 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 67.7 | 68.4 |
| GSMUA_Achr10P... | Banana | cytosol | 8.62 | 67.68 |
| AT4G21530.1 | Thale cress | cytosol | 66.02 | 66.02 |
| CDX79070 | Canola | cytosol | 65.25 | 65.59 |
| CDX82833 | Canola | cytosol | 65.12 | 65.46 |
| Bra013534.1-P | Field mustard | cytosol | 64.99 | 65.33 |
| Os02t0785900-00 | Rice | cytosol | 11.33 | 60.69 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 36.81 | 58.49 |
| TraesCSU01G081200.2 | Wheat | cytosol | 52.38 | 52.52 |
| Zm00001d040015_P001 | Maize | cytosol | 9.52 | 52.48 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 52.25 | 52.45 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 52.38 | 52.45 |
| EES05908 | Sorghum | cytosol | 50.58 | 51.04 |
| Zm00001d052072_P003 | Maize | cytosol | 49.94 | 49.62 |
| Zm00001d035596_P001 | Maize | cytosol | 11.2 | 43.28 |
| Zm00001d038666_P002 | Maize | cytosol | 7.72 | 42.55 |
| GSMUA_Achr10P... | Banana | mitochondrion | 11.84 | 38.82 |
| Zm00001d045047_P002 | Maize | nucleus, plastid | 6.56 | 34.0 |
Protein Annotations
| EntrezGene:100527617 | MapMan:13.3.4.1.1.1.2 | EMBL:ACUP02004648 | InterPro:APC4 | InterPro:APC4_long_dom | InterPro:Apc4_WD40_dom |
| EnsemblPlantsGene:GLYMA_07G190600 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 |
| GO:GO:0048481 | InterPro:IPR001680 | UniProt:K7L2M1 | EnsemblPlants:KRH49954 | ProteinID:KRH49954 | ProteinID:KRH49954.1 |
| PFAM:PF12894 | PFAM:PF12896 | PANTHER:PTHR13260 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0002337EE3 |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:35823693..35834394
Molecular Weight (calculated)
87497.0 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.074
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: METDESSRVI PFQLQFDKPL ASQIKIAEWN PEKDLLAMVT DDSKILLHRF NWQRLWTITP GRCITSLCWR PDGKAIAVGL DDGTLSLHDV ENGKLLRSLK
101: SHCAAIICLN WEEESQLITD DFGHTSKYED RTSRFFPPAP RVPRMPGLVS GDNGFMDDSE DSFQELSNSS HQRFNILCSA DKDGNICFSI FGIFPIGKVN
201: IHNLTFPTFC DGSEMSNGVS NALIHKVALS KDLCRLIVTC SGDLVKVGDD LGEIQMVGNN EHGLHCLALN TAIFWNRKNE LHQVAQQASN IEDLTEVVRT
301: SLSVMCRQWS DAMNTFQEKF RSLSTLIINH GLDSSPQEEF LSLLGGARTS PPVHQFLVNT LGEVGVKRIS KVLSGAGKEL QRIVLDHLQP AVEVIGFRIG
401: ELRGLSRWRA RYHGIGLDES LINNATEKAG MLLVQVERFM RVLSSVVQQY SNFFNWLLKC IKLLMSEPSD QLLPYNSELV IVFLKFLYEQ DPVKQLLEVS
501: ETEYEVEIDL ETMQRVRELV QFGGFADTEY LRRTLVKEFQ LMELSFKEAF EMPFTTISRK ILCEDILPLF PLPSLPKSSS SMWIPTSVSY YEDPSRASVP
601: PYSCQNQFID YISFQVPDEC FSDIVNCICI VRGFMHDSDC LKKGYSSLEA VLLCVPVDYQ CVDLSLYKDS QIVLLLNKAT NTSESAGDGC MMILQVSDLP
701: YVSMSRSACI DVWRLPELKD SVAYLNIGDE KSRTIRHSVI APLAVSASRG VACVFAATKR ALVYILEEDE DEVSDVE
101: SHCAAIICLN WEEESQLITD DFGHTSKYED RTSRFFPPAP RVPRMPGLVS GDNGFMDDSE DSFQELSNSS HQRFNILCSA DKDGNICFSI FGIFPIGKVN
201: IHNLTFPTFC DGSEMSNGVS NALIHKVALS KDLCRLIVTC SGDLVKVGDD LGEIQMVGNN EHGLHCLALN TAIFWNRKNE LHQVAQQASN IEDLTEVVRT
301: SLSVMCRQWS DAMNTFQEKF RSLSTLIINH GLDSSPQEEF LSLLGGARTS PPVHQFLVNT LGEVGVKRIS KVLSGAGKEL QRIVLDHLQP AVEVIGFRIG
401: ELRGLSRWRA RYHGIGLDES LINNATEKAG MLLVQVERFM RVLSSVVQQY SNFFNWLLKC IKLLMSEPSD QLLPYNSELV IVFLKFLYEQ DPVKQLLEVS
501: ETEYEVEIDL ETMQRVRELV QFGGFADTEY LRRTLVKEFQ LMELSFKEAF EMPFTTISRK ILCEDILPLF PLPSLPKSSS SMWIPTSVSY YEDPSRASVP
601: PYSCQNQFID YISFQVPDEC FSDIVNCICI VRGFMHDSDC LKKGYSSLEA VLLCVPVDYQ CVDLSLYKDS QIVLLLNKAT NTSESAGDGC MMILQVSDLP
701: YVSMSRSACI DVWRLPELKD SVAYLNIGDE KSRTIRHSVI APLAVSASRG VACVFAATKR ALVYILEEDE DEVSDVE
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.