Factsheet for Zm00001d038666_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040015_P001	Maize	cytosol	71.63	71.63
Zm00001d035596_P001	Maize	cytosol	82.98	58.21
Zm00001d052072_P003	Maize	cytosol	71.63	12.92
EES05908	Sorghum	cytosol	67.38	12.34
VIT_00s0181g00190.t01	Wine grape	cytosol	35.46	11.44
TraesCSU01G081200.2	Wheat	cytosol	61.7	11.23
TraesCS6B01G377000.1	Wheat	cytosol	60.99	11.08
GSMUA_Achr10P...	Banana	extracellular, golgi	38.3	11.04
TraesCS6D01G327000.1	Wheat	cytosol	60.28	10.98
VIT_00s0181g00210.t01	Wine grape	cytosol	46.1	8.43
KRH49954	Soybean	cytosol	42.55	7.72
AT4G21530.1	Thale cress	cytosol	39.72	7.21
Solyc02g079050.2.1	Tomato	mitochondrion	39.01	7.15
Bra013534.1-P	Field mustard	cytosol	37.59	6.86
CDX79070	Canola	cytosol	37.59	6.86
CDX82833	Canola	cytosol	36.88	6.73
GSMUA_Achr10P...	Banana	mitochondrion	6.38	3.8
GSMUA_Achr10P...	Banana	cytosol	0.0	0.0
Zm00001d045047_P002	Maize	nucleus, plastid	0.0	0.0
Zm00001d052917_P001	Maize	cytosol	0.0	0.0

Protein Annotations

MapMan:13.3.4.1.1.1.2	UniProt:A0A1D6M7Z4	InterPro:APC4	ProteinID:AQK87143.1	ProteinID:AQK87144.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005680	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030071
GO:GO:0031145	PANTHER:PTHR13260	UniParc:UPI0008441EDF	EnsemblPlantsGene:Zm00001d038666	EnsemblPlants:Zm00001d038666_P002	EnsemblPlants:Zm00001d038666_T002

Description

Anaphase-promoting complex subunit 4

Coordinates

chr6:+:162226504..162227478

Molecular Weight (calculated)

15362.3 Da

IEP (calculated)

4.900

GRAVY (calculated)

-0.030

Length

141 amino acids

Sequence
(BLAST)

001: MLRTTKSHDV AIVSLNCAED DPLSKSDKDE FLSYEDRTTR FFPPVMPRIG GLRSGDTGLA DENEEAIPEF SNASCQCFNI VCSGGKDGCV CFSIFGIFPV
101: GKIATFPVIG SGDLSTLTAH LEICSTQKYF VKLICSFKQS K

Best Arabidopsis Sequence Match ( AT4G21530.1 )
(BLAST)

001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK

Arabidopsis Description

APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.