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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48150.1 VIT_05s0020g03180.t01 AT1G03130.1 21798944
AT3G48150.1 VIT_07s0151g01000.t01 AT1G03130.1 21798944
AT3G48150.1 VIT_02s0012g02000.t01 AT1G06590.1 20706207
AT3G48150.1 VIT_12s0028g00720.t01 AT1G06590.1 20706207
AT3G48150.1 VIT_12s0028g00740.t01 AT1G06590.1 20706207
AT3G48150.1 VIT_03s0091g00480.t01 AT1G49850.1 21798944
AT3G48150.1 VIT_18s0075g00250.t01 AT1G71970.1 21798944
AT3G48150.1 VIT_18s0075g00270.t01 AT1G71970.1 21798944
AT3G48150.1 VIT_18s0041g01150.t01 AT1G72030.1 21798944
AT3G48150.1 VIT_18s0041g01190.t01 AT1G72030.1 21798944
AT3G48150.1 VIT_18s0041g01220.t01 AT1G72030.1 21798944
AT3G48150.1 VIT_18s0001g02100.t01 AT1G77400.1 21798944
AT3G48150.1 VIT_19s0014g01170.t01 AT1G78770.1 20706207
AT3G48150.1 VIT_01s0026g02730.t01 AT2G04660.1 14508008
AT3G48150.1 VIT_11s0016g00830.t01 AT2G05830.1 20706207
AT3G48150.1 VIT_17s0053g00580.t01 AT2G05830.1 20706207
AT3G48150.1 VIT_03s0038g02110.t01 AT2G17880.1 21798944
AT3G48150.1 VIT_04s0023g03470.t01 AT2G17880.1 21798944
AT3G48150.1 VIT_05s0020g01720.t01 AT2G39100.1 21798944
AT3G48150.1 VIT_06s0004g07940.t01 AT2G40590.1 21798944
AT3G48150.1 VIT_13s0067g02700.t01 AT2G40590.1 21798944
AT3G48150.1 VIT_08s0007g07790.t01 AT2G42260.1 20706207
AT3G48150.1 VIT_05s0102g00080.t01 AT2G43370.1 21798944
AT3G48150.1 VIT_19s0015g01370.t01 AT3G13310.1 21798944
AT3G48150.1 VIT_19s0177g00260.t01 AT3G15160.1 21798944
AT3G48150.1 VIT_00s0238g00110.t01 AT3G15360.1 21798944
AT3G48150.1 VIT_19s0014g02890.t01 AT3G15360.1 21798944
AT3G48150.1 VIT_15s0021g00250.t01 AT3G17668.1 21798944
AT3G48150.1 VIT_05s0077g02340.t01 AT3G62790.1 21798944
AT3G48150.1 VIT_00s0181g00190.t01 AT4G21530.1 20706207
AT3G48150.1 VIT_00s0181g00210.t01 AT4G21530.1 20706207
AT3G48150.1 VIT_17s0000g10250.t01 AT4G24820.1 20706207
AT3G48150.1 VIT_03s0038g00880.t01 AT4G34740.1 21798944
AT3G48150.1 VIT_04s0023g03230.t01 AT4G36110.1 21798944
AT3G48150.1 VIT_04s0043g00340.t01 AT5G16560.1 21798944
AT3G48150.1 VIT_00s0333g00060.t01 AT5G48500.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0130g00490.t01 Wine grape cytosol 94.63 94.63
PGSC0003DMT400063189 Potato cytosol 80.94 85.85
Solyc03g113740.2.1 Tomato cytosol, mitochondrion 85.1 85.24
KRH27971 Soybean nucleus 84.4 84.4
KRH77487 Soybean nucleus 84.06 83.91
KRH24006 Soybean cytosol 80.59 78.95
AT3G48150.1 Thale cress cytosol 78.34 78.07
Bra033769.1-P Field mustard nucleus 77.82 77.68
Bra018081.1-P Field mustard cytosol 77.12 76.86
CDY58070 Canola cytosol 65.34 76.16
CDY70805 Canola nucleus 39.69 76.08
CDY36901 Canola cytosol 64.3 74.05
CDY44976 Canola cytosol 64.3 73.47
GSMUA_Achr11P... Banana cytosol 72.1 68.87
CDY58069 Canola nucleus 53.21 68.83
Os02t0656300-01 Rice cytosol 70.19 67.84
TraesCS6A01G251400.1 Wheat cytosol 70.36 67.78
TraesCS6B01G273900.1 Wheat cytosol 70.36 67.78
TraesCS6D01G233200.1 Wheat cytosol 70.19 67.61
EES07517 Sorghum cytosol 70.19 67.5
Zm00001d017475_P002 Maize cytosol 70.02 67.45
HORVU0Hr1G027080.4 Barley plastid 64.82 62.33
HORVU6Hr1G062870.1 Barley cytosol, plastid 70.02 62.25
KRH29310 Soybean cytosol 34.32 61.88
Os06t0679100-00 Rice plastid 15.94 51.69
VIT_11s0016g03260.t01 Wine grape cytosol 18.37 13.93
Protein Annotations
Gene3D:1.25.40.10EntrezGene:100247356wikigene:100247356MapMan:13.3.4.1.1.2.4InterPro:APC8ProteinID:CCB47147
ProteinID:CCB47147.1UniProt:F6H4D6EMBL:FN595233GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005680GO:GO:0007049
GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0030071InterPro:IPR011990InterPro:IPR013026
InterPro:IPR019734EntrezGene:LOC100247356wikigene:LOC100247356PFAM:PF04049PFAM:PF13181PFAM:PF13414
PFscan:PS50005PFscan:PS50293PANTHER:PTHR12558PANTHER:PTHR12558:SF10SMART:SM00028SUPFAM:SSF48452
InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI00015C935EArrayExpress:VIT_07s0031g02330EnsemblPlantsGene:VIT_07s0031g02330
EnsemblPlants:VIT_07s0031g02330.t01unigene:Vvi.21466RefSeq:XP_002274876RefSeq:XP_002274876.1RefSeq:XP_019076429.1SEG:seg
Description
No Description!
Coordinates
chr7:+:18443502..18452666
Molecular Weight (calculated)
67234.0 Da
IEP (calculated)
6.586
GRAVY (calculated)
-0.484
Length
577 amino acids
Sequence
(BLAST)
001: MSSKESCRNE LRTAICQLSD RCLYSAAKWA AEQLVGIEQD PAKFTPSHTR FQLGSSSIRR RFRTNEIAST PTAGVSSVST PMLEEDEAID GDFYLLAKSY
101: FDCREYRRAA HVLRDQTRKK AVFLRCYALY LAGEKRKEEE MIELEGPLGK SDAVNHELVY LERELSMLRK NGTVDPFGLY LYGLVLNKKG SENLARTVLV
201: ESVNSYPWNW NAWTELQSLC TTIDILNSLN LNYHWMKDFF LANAYQELRM HNESLGKYEY LQGTFSFSNY IQAQIAKAQY SLREFEQVEV IFEELLRNDP
301: YRVEDMDMYS NVLYAKECFS TLSYLAHRVF LTDKYRPESC FIIGNYYSLK GQHEKSVVYF RRALKLNKNY LSAWTLMGHE YVEMKNTPAA VDAYRRAVDI
401: NPCDYRAWYG LGQAYEMMGM PYYALHYFRK SVFLQPNDSR LWIAMGQCYE TDQLQMLEDA IKCYKRAANC NDTEAIALHQ IAKLSKDLKR SEEAAFYYKK
501: DLERMEAEER EGPNLVEALL FLATYYKSQK RFEEAEIYCT RLLDYTGPEK ETAKSLLRGM RKAQSGFSSI DIEHLPP
Best Arabidopsis Sequence Match ( AT3G48150.1 )
(BLAST)
001: MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
Arabidopsis Description
APC8Anaphase-promoting complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.