Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 6
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_07s0141g00220.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36110.1 | VIT_07s0141g00220.t01 | AT4G02590.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0038g00950.t01 | Wine grape | mitochondrion | 82.69 | 82.69 |
| KRH28787 | Soybean | cytosol, mitochondrion | 80.77 | 80.77 |
| VIT_18s0001g13980.t01 | Wine grape | mitochondrion | 79.81 | 79.81 |
| KRH08093 | Soybean | cytosol | 80.77 | 79.25 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 75.0 | 78.79 |
| KRH69796 | Soybean | cytosol | 80.77 | 78.5 |
| Bra034651.1-P | Field mustard | mitochondrion | 77.88 | 77.88 |
| AT4G38860.1 | Thale cress | mitochondrion | 77.88 | 77.14 |
| PGSC0003DMT400058186 | Potato | cytosol | 74.04 | 77.0 |
| CDY63257 | Canola | mitochondrion | 78.85 | 76.64 |
| CDX76303 | Canola | mitochondrion | 78.85 | 76.64 |
| CDY70461 | Canola | mitochondrion | 78.85 | 76.64 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 70.19 | 76.04 |
| CDY22408 | Canola | mitochondrion | 75.96 | 75.96 |
| Bra033581.1-P | Field mustard | mitochondrion | 75.96 | 75.96 |
| CDX72733 | Canola | mitochondrion | 75.96 | 75.96 |
| AT4G34760.1 | Thale cress | mitochondrion | 77.88 | 75.7 |
| Bra011560.1-P | Field mustard | mitochondrion | 77.88 | 75.7 |
| CDX75460 | Canola | mitochondrion | 77.88 | 75.7 |
| CDY41947 | Canola | mitochondrion | 75.96 | 75.24 |
| Bra011889.1-P | Field mustard | mitochondrion | 75.96 | 75.24 |
| AT2G21220.1 | Thale cress | mitochondrion | 75.0 | 75.0 |
| PGSC0003DMT400075050 | Potato | cytosol | 69.23 | 75.0 |
| CDY42589 | Canola | mitochondrion | 75.0 | 74.29 |
| Bra031171.1-P | Field mustard | mitochondrion | 74.04 | 74.04 |
| CDX82007 | Canola | mitochondrion | 74.04 | 74.04 |
| CDY13831 | Canola | mitochondrion | 74.04 | 74.04 |
| CDX69086 | Canola | mitochondrion | 75.96 | 73.83 |
| CDY47053 | Canola | mitochondrion, plastid | 70.19 | 73.74 |
| Bra017747.1-P | Field mustard | mitochondrion, plastid | 70.19 | 73.74 |
| Bra010501.1-P | Field mustard | mitochondrion | 72.12 | 72.12 |
| CDY08909 | Canola | mitochondrion | 72.12 | 72.12 |
| CDY24829 | Canola | mitochondrion | 72.12 | 72.12 |
| CDY45331 | Canola | mitochondrion | 74.04 | 71.96 |
| Bra017676.1-P | Field mustard | mitochondrion | 74.04 | 71.96 |
| CDX72576 | Canola | mitochondrion | 68.27 | 71.72 |
| CDX72500 | Canola | mitochondrion | 73.08 | 71.03 |
| AT4G36110.1 | Thale cress | mitochondrion | 70.19 | 70.19 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 67.31 | 69.31 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 67.31 | 68.63 |
| AT2G16580.1 | Thale cress | mitochondrion | 71.15 | 68.52 |
| CDX75553 | Canola | mitochondrion, plastid | 67.31 | 67.31 |
| CDX69199 | Canola | mitochondrion, plastid | 67.31 | 67.31 |
| Bra011662.1-P | Field mustard | mitochondrion, plastid | 67.31 | 67.31 |
| CDX89731 | Canola | mitochondrion | 69.23 | 66.67 |
| CDY02251 | Canola | mitochondrion | 68.27 | 65.74 |
| Bra013061.1-P | Field mustard | mitochondrion | 68.27 | 65.74 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 69.23 | 64.29 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 65.38 | 62.96 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 64.42 | 62.04 |
| Bra039909.1-P | Field mustard | mitochondrion | 64.42 | 62.04 |
| Bra024482.1-P | Field mustard | mitochondrion | 63.46 | 61.11 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 62.5 | 60.19 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 62.5 | 60.19 |
| Bra037243.1-P | Field mustard | cytosol, mitochondrion, nucleus | 62.5 | 60.19 |
| KRH76667 | Soybean | cytosol, plastid | 77.88 | 53.64 |
| VIT_07s0130g00100.t01 | Wine grape | cytosol | 31.73 | 41.25 |
| CDY20904 | Canola | cytosol, extracellular | 46.15 | 37.8 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 35.58 | 29.84 |
Protein Annotations
| EntrezGene:100252339 | wikigene:100252339 | MapMan:35.1 | ProteinID:CCB44371 | ProteinID:CCB44371.1 | UniProt:F6GWN6 |
| EMBL:FN594959 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | EntrezGene:LOC100252339 | wikigene:LOC100252339 |
| PFAM:PF02519 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | InterPro:SAUR_fam | TIGR:TC55019 | TIGR:TC57299 |
| UniParc:UPI000198302D | ArrayExpress:VIT_04s0023g03230 | EnsemblPlantsGene:VIT_04s0023g03230 | EnsemblPlants:VIT_04s0023g03230.t01 | RefSeq:XP_002269183 | RefSeq:XP_002269183.1 |
Description
No Description!
Coordinates
chr4:-:19786553..19787347
Molecular Weight (calculated)
11690.2 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.269
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKKSNKLP QPAALKQILK RCSSFGKKPG YDQGSLPDDV PKGHFAVYVG ENRSRYIVPI SWLAHPEFQG LLQRAEEEFG FNHDMGLTIP CEEVVFLSLT
101: AMIR
101: AMIR
001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR
101: TLTSMIR
Arabidopsis Description
SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.