Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011560.1-P | Field mustard | mitochondrion | 96.26 | 96.26 |
| CDX75460 | Canola | mitochondrion | 95.33 | 95.33 |
| CDX69086 | Canola | mitochondrion | 94.39 | 94.39 |
| CDY45331 | Canola | mitochondrion | 92.52 | 92.52 |
| Bra017676.1-P | Field mustard | mitochondrion | 92.52 | 92.52 |
| CDY70461 | Canola | mitochondrion | 91.59 | 91.59 |
| CDY63257 | Canola | mitochondrion | 91.59 | 91.59 |
| CDX76303 | Canola | mitochondrion | 91.59 | 91.59 |
| CDX72500 | Canola | mitochondrion | 91.59 | 91.59 |
| Bra034651.1-P | Field mustard | mitochondrion | 87.85 | 90.38 |
| AT2G16580.1 | Thale cress | mitochondrion | 84.11 | 83.33 |
| AT4G38860.1 | Thale cress | mitochondrion | 80.37 | 81.9 |
| AT2G21220.1 | Thale cress | mitochondrion | 78.5 | 80.77 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 75.7 | 77.88 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 71.03 | 76.77 |
| PGSC0003DMT400058186 | Potato | cytosol | 71.03 | 76.0 |
| AT1G75580.1 | Thale cress | mitochondrion | 76.64 | 75.93 |
| KRH08093 | Soybean | cytosol | 74.77 | 75.47 |
| PGSC0003DMT400075050 | Potato | cytosol | 67.29 | 75.0 |
| KRH69796 | Soybean | cytosol | 74.77 | 74.77 |
| KRH28787 | Soybean | cytosol, mitochondrion | 71.96 | 74.04 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 66.36 | 73.96 |
| AT4G36110.1 | Thale cress | mitochondrion | 71.03 | 73.08 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 73.83 | 70.54 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 66.36 | 70.3 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 66.36 | 69.61 |
| AT1G19830.1 | Thale cress | mitochondrion | 71.96 | 65.81 |
| AT5G66260.1 | Thale cress | cytosol | 55.14 | 59.6 |
| AT3G51200.1 | Thale cress | nucleus | 51.4 | 51.89 |
| KRH76667 | Soybean | cytosol, plastid | 71.03 | 50.33 |
| AT4G09530.1 | Thale cress | cytosol | 28.97 | 30.1 |
| AT2G37030.1 | Thale cress | cytosol | 33.64 | 29.03 |
| AT5G03310.1 | Thale cress | mitochondrion | 28.97 | 27.19 |
| AT3G53250.2 | Thale cress | endoplasmic reticulum, extracellular | 31.78 | 21.94 |
Protein Annotations
| MapMan:35.1 | EntrezGene:829628 | UniProt:A0A178V1V7 | ProteinID:AEE86420.1 | ArrayExpress:AT4G34760 | EnsemblPlantsGene:AT4G34760 |
| RefSeq:AT4G34760 | TAIR:AT4G34760 | RefSeq:AT4G34760-TAIR-G | EnsemblPlants:AT4G34760.1 | TAIR:AT4G34760.1 | EMBL:AY042802 |
| EMBL:AY084348 | EMBL:BT000358 | ProteinID:CAA18855.1 | ProteinID:CAB80193.1 | GO:GO:0003674 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0040007 | GO:GO:0040008 | RefSeq:NP_195202.1 | UniProt:O65695 | ProteinID:OAP00189.1 | PFAM:PF02519 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | InterPro:SAUR_fam | UniParc:UPI000005EAC5 | : | : |
Description
SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
Coordinates
chr4:-:16582183..16583075
Molecular Weight (calculated)
12139.8 Da
IEP (calculated)
7.439
GRAVY (calculated)
-0.259
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR
101: TLTSMIR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.