Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
- nucleus 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G36110.1 | KRG95612 | AT4G02590.1 | 21798944 |
AT4G36110.1 | KRH32094 | AT4G02590.1 | 21798944 |
AT4G36110.1 | KRH55381 | AT4G02590.1 | 21798944 |
AT4G36110.1 | KRH67287 | AT4G02590.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH08093 | Soybean | cytosol | 99.07 | 100.0 |
KRH28787 | Soybean | cytosol, mitochondrion | 87.85 | 90.38 |
VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 78.5 | 80.77 |
KRH39815 | Soybean | mitochondrion | 74.77 | 76.92 |
KRH24349 | Soybean | mitochondrion | 73.83 | 75.24 |
Bra011560.1-P | Field mustard | mitochondrion | 74.77 | 74.77 |
CDX75460 | Canola | mitochondrion | 74.77 | 74.77 |
AT4G34760.1 | Thale cress | mitochondrion | 74.77 | 74.77 |
Solyc03g033590.1.1 | Tomato | mitochondrion | 69.16 | 74.75 |
AT4G38860.1 | Thale cress | mitochondrion | 72.9 | 74.29 |
CDX72733 | Canola | mitochondrion | 71.96 | 74.04 |
CDY22408 | Canola | mitochondrion | 71.96 | 74.04 |
Bra033581.1-P | Field mustard | mitochondrion | 71.96 | 74.04 |
PGSC0003DMT400058186 | Potato | cytosol | 69.16 | 74.0 |
Bra034651.1-P | Field mustard | mitochondrion | 71.03 | 73.08 |
CDY70461 | Canola | mitochondrion | 72.9 | 72.9 |
CDX69086 | Canola | mitochondrion | 72.9 | 72.9 |
CDY63257 | Canola | mitochondrion | 72.9 | 72.9 |
CDX76303 | Canola | mitochondrion | 72.9 | 72.9 |
KRH60748 | Soybean | cytosol | 71.96 | 72.64 |
KRH51448 | Soybean | cytosol | 71.96 | 72.64 |
CDY41947 | Canola | mitochondrion | 71.03 | 72.38 |
Bra011889.1-P | Field mustard | mitochondrion | 71.03 | 72.38 |
AT2G21220.1 | Thale cress | mitochondrion | 70.09 | 72.12 |
Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 64.49 | 71.88 |
Bra031171.1-P | Field mustard | mitochondrion | 69.16 | 71.15 |
CDY13831 | Canola | mitochondrion | 69.16 | 71.15 |
CDX82007 | Canola | mitochondrion | 69.16 | 71.15 |
CDY45331 | Canola | mitochondrion | 71.03 | 71.03 |
Bra017676.1-P | Field mustard | mitochondrion | 71.03 | 71.03 |
PGSC0003DMT400075050 | Potato | cytosol | 63.55 | 70.83 |
Bra017747.1-P | Field mustard | mitochondrion, plastid | 65.42 | 70.71 |
CDY47053 | Canola | mitochondrion, plastid | 65.42 | 70.71 |
CDY42589 | Canola | mitochondrion | 69.16 | 70.48 |
CDX72500 | Canola | mitochondrion | 70.09 | 70.09 |
KRH51719 | Soybean | mitochondrion | 65.42 | 70.0 |
KRH61056 | Soybean | mitochondrion | 65.42 | 70.0 |
AT4G36110.1 | Thale cress | mitochondrion | 67.29 | 69.23 |
CDX72576 | Canola | mitochondrion | 63.55 | 68.69 |
CDY24829 | Canola | mitochondrion | 66.36 | 68.27 |
Bra010501.1-P | Field mustard | mitochondrion | 66.36 | 68.27 |
CDY08909 | Canola | mitochondrion | 66.36 | 68.27 |
AT2G16580.1 | Thale cress | mitochondrion | 68.22 | 67.59 |
AT2G18010.1 | Thale cress | cytosol, plastid | 70.09 | 66.96 |
CDX89731 | Canola | mitochondrion | 67.29 | 66.67 |
CDX75553 | Canola | mitochondrion, plastid | 64.49 | 66.35 |
Bra011662.1-P | Field mustard | mitochondrion, plastid | 64.49 | 66.35 |
CDX69199 | Canola | mitochondrion, plastid | 64.49 | 66.35 |
PGSC0003DMT400009439 | Potato | mitochondrion | 62.62 | 66.34 |
CDY02251 | Canola | mitochondrion | 66.36 | 65.74 |
Bra013061.1-P | Field mustard | mitochondrion | 66.36 | 65.74 |
Solyc02g084010.1.1 | Tomato | mitochondrion | 62.62 | 65.69 |
CDY68553 | Canola | cytosol, mitochondrion, nucleus | 64.49 | 63.89 |
CDY38169 | Canola | cytosol, mitochondrion, nucleus | 63.55 | 62.96 |
Bra039909.1-P | Field mustard | mitochondrion | 63.55 | 62.96 |
Bra037243.1-P | Field mustard | cytosol, mitochondrion, nucleus | 62.62 | 62.04 |
CDY54551 | Canola | cytosol, mitochondrion, nucleus | 62.62 | 62.04 |
CDY30334 | Canola | cytosol, mitochondrion, nucleus | 62.62 | 62.04 |
Bra024482.1-P | Field mustard | mitochondrion | 62.62 | 62.04 |
KRH76667 | Soybean | cytosol, plastid | 85.98 | 60.93 |
KRH63924 | Soybean | cytosol | 28.97 | 39.24 |
CDY20904 | Canola | cytosol, extracellular | 45.79 | 38.58 |
KRH54020 | Soybean | cytosol | 28.04 | 37.5 |
KRH34853 | Soybean | mitochondrion | 33.64 | 30.51 |
KRH67711 | Soybean | cytosol | 28.97 | 29.25 |
KRH19939 | Soybean | cytosol | 32.71 | 28.46 |
KRH32539 | Soybean | cytosol | 31.78 | 27.2 |
KRG91926 | Soybean | mitochondrion | 30.84 | 26.4 |
KRG95997 | Soybean | mitochondrion | 30.84 | 26.4 |
Protein Annotations
EMBL:ACUP02000729 | EMBL:BT092062 | EnsemblPlants:KRH69796 | EnsemblPlantsGene:GLYMA_02G049200 | EntrezGene:100527235 | GO:GO:0008150 |
GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | PFAM:PF02519 |
ProteinID:KRH69796 | ProteinID:KRH69796.1 | UniParc:UPI0001B15543 | UniProt:C6T3Q1 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr2:+:4479569..4480377
Molecular Weight (calculated)
12271.8 Da
IEP (calculated)
7.510
GRAVY (calculated)
-0.420
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIKKSNKLP QADVIKQIVR RCSSFGKKQQ QGYNEEGGLP EDVPKGHFAV YVGENRTRYI VPISWLAHPQ FQSLLQRAEE EFGFNHDMGL TIPCDEVVFE
101: FLTSMIR
101: FLTSMIR
001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR
101: TLTSMIR
Arabidopsis Description
SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.