Factsheet for Bra011889.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41947	Canola	mitochondrion	100.0	100.0
CDY42589	Canola	mitochondrion	98.1	98.1
AT4G38860.1	Thale cress	mitochondrion	96.19	96.19
Bra033581.1-P	Field mustard	mitochondrion	95.24	96.15
Bra031171.1-P	Field mustard	mitochondrion	82.86	83.65
Bra011560.1-P	Field mustard	mitochondrion	80.0	78.5
Bra034651.1-P	Field mustard	mitochondrion	77.14	77.88
VIT_04s0023g03230.t01	Wine grape	mitochondrion	75.24	75.96
Bra008207.1-P	Field mustard	cytosol, mitochondrion	68.57	75.79
KRH28787	Soybean	cytosol, mitochondrion	73.33	74.04
Bra017676.1-P	Field mustard	mitochondrion	75.24	73.83
Bra003746.1-P	Field mustard	mitochondrion	75.24	73.15
Bra015832.1-P	Field mustard	mitochondrion	74.29	72.22
Solyc03g033590.1.1	Tomato	mitochondrion	67.62	71.72
KRH08093	Soybean	cytosol	72.38	71.7
KRH69796	Soybean	cytosol	72.38	71.03
Bra017747.1-P	Field mustard	mitochondrion, plastid	66.67	70.71
PGSC0003DMT400058186	Potato	cytosol	66.67	70.0
Bra010501.1-P	Field mustard	mitochondrion	68.57	69.23
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	62.86	68.75
PGSC0003DMT400075050	Potato	cytosol	62.86	68.75
Bra013061.1-P	Field mustard	mitochondrion	68.57	66.67
Bra011662.1-P	Field mustard	mitochondrion, plastid	64.76	65.38
PGSC0003DMT400009439	Potato	mitochondrion	61.9	64.36
Solyc02g084010.1.1	Tomato	mitochondrion	61.9	63.73
Bra039909.1-P	Field mustard	mitochondrion	64.76	62.96
Bra025770.1-P	Field mustard	cytosol, mitochondrion	65.71	61.06
Bra024482.1-P	Field mustard	mitochondrion	61.9	60.19
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	61.9	60.19
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	56.19	59.0
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	50.48	50.48
KRH76667	Soybean	cytosol, plastid	70.48	49.01
Bra000682.1-P	Field mustard	cytosol	30.48	32.65
Bra009535.1-P	Field mustard	mitochondrion	30.48	29.91
Bra023093.1-P	Field mustard	cytosol	35.24	29.84
Bra017211.1-P	Field mustard	mitochondrion	33.33	29.66
Bra005223.1-P	Field mustard	cytosol	35.24	29.6
Bra028841.1-P	Field mustard	mitochondrion	30.48	28.83
Bra006984.1-P	Field mustard	cytosol	30.48	24.62
Bra003125.1-P	Field mustard	cytosol	30.48	24.43

Protein Annotations

EnsemblPlants:Bra011889.1	EnsemblPlants:Bra011889.1-P	EnsemblPlantsGene:Bra011889	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	UniParc:UPI0002545C9F	UniProt:M4D5Y2
MapMan:35.1	:	:	:	:	:

Description

AT4G38860 (E=5e-055) | auxin-responsive protein, putative

Coordinates

chrA01:+:66052..66369

Molecular Weight (calculated)

11969.8 Da

IEP (calculated)

8.081

GRAVY (calculated)

-0.082

Length

105 amino acids

Sequence
(BLAST)

001: MAVKRSSKVT QTAMLKQILK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG EKRTRYIVPI TFLSHPEFLI LLQQAEEEFG FHHDMGGLTI PCEEVVFLSL
101: TSMIR

Best Arabidopsis Sequence Match ( AT4G38860.1 )
(BLAST)

001: MAVKRSSKLT QTAMLKQILK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG EKRTRYIVPI SFLTHPEFLI LLQQAEEEFG FRHDMGGLTI PCEEVVFLSL
101: TSMIR

Arabidopsis Description

At4g38860 [Source:UniProtKB/TrEMBL;Acc:Q9T0J3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.