Factsheet for Bra025770.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29398	Canola	cytosol, mitochondrion	98.23	98.23
CDY55152	Canola	cytosol, mitochondrion	98.23	98.23
AT1G19830.1	Thale cress	mitochondrion	83.19	80.34
Bra008207.1-P	Field mustard	cytosol, mitochondrion	63.72	75.79
Bra003746.1-P	Field mustard	mitochondrion	71.68	75.0
Bra015832.1-P	Field mustard	mitochondrion	69.91	73.15
VIT_18s0001g13980.t01	Wine grape	mitochondrion	66.37	72.12
KRH61056	Soybean	mitochondrion	62.83	71.0
KRH51719	Soybean	mitochondrion	62.83	71.0
GSMUA_Achr1P02500_001	Banana	mitochondrion	60.18	68.69
GSMUA_Achr5P11350_001	Banana	mitochondrion	58.41	67.35
Bra034651.1-P	Field mustard	mitochondrion	61.95	67.31
Bra031171.1-P	Field mustard	mitochondrion	61.06	66.35
Bra033581.1-P	Field mustard	mitochondrion	61.06	66.35
Solyc04g081270.1.1	Tomato	mitochondrion	62.83	65.74
Bra011889.1-P	Field mustard	mitochondrion	61.06	65.71
Bra011560.1-P	Field mustard	mitochondrion	61.95	65.42
GSMUA_Achr11P...	Banana	mitochondrion	59.29	65.05
PGSC0003DMT400009665	Potato	mitochondrion	59.29	62.04
Bra017676.1-P	Field mustard	mitochondrion	58.41	61.68
GSMUA_Achr3P11290_001	Banana	mitochondrion	54.87	60.78
Bra010501.1-P	Field mustard	mitochondrion	55.75	60.58
Bra017747.1-P	Field mustard	mitochondrion, plastid	52.21	59.6
Bra013061.1-P	Field mustard	mitochondrion	56.64	59.26
GSMUA_Achr1P19860_001	Banana	mitochondrion	54.87	58.49
Bra011662.1-P	Field mustard	mitochondrion, plastid	53.1	57.69
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	54.87	57.41
Bra039909.1-P	Field mustard	mitochondrion	54.87	57.41
GSMUA_Achr1P06110_001	Banana	mitochondrion	49.56	56.57
Bra024482.1-P	Field mustard	mitochondrion	53.1	55.56
GSMUA_Achr7P06520_001	Banana	mitochondrion	50.44	55.34
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	46.9	53.0
Os02t0445600-01	Rice	cytosol, mitochondrion	44.25	51.55
Os02t0445100-01	Rice	mitochondrion	41.59	48.96
Zm00001d051802_P001	Maize	mitochondrion	48.67	47.83
Os06t0137400-00	Rice	mitochondrion	48.67	46.22
Zm00001d045423_P001	Maize	cytosol	50.44	45.6
KXG19242	Sorghum	mitochondrion	50.44	44.88
TraesCS4A01G375500.1	Wheat	mitochondrion	46.9	44.54
TraesCS7A01G077000.1	Wheat	mitochondrion	46.9	44.17
TraesCS7D01G072600.1	Wheat	mitochondrion	46.9	42.4
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	38.94	41.9
Zm00001d004578_P001	Maize	plastid	38.94	35.48
Bra017211.1-P	Field mustard	mitochondrion	33.63	32.2
Bra023093.1-P	Field mustard	cytosol	34.51	31.45
Zm00001d012222_P001	Maize	cytosol	40.71	30.67
Zm00001d051962_P001	Maize	cytosol	43.36	30.62
Bra000682.1-P	Field mustard	cytosol	26.55	30.61
Bra005223.1-P	Field mustard	cytosol	33.63	30.4
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	46.9	29.44
Bra009535.1-P	Field mustard	mitochondrion	27.43	28.97
Bra028841.1-P	Field mustard	mitochondrion	26.55	27.03
Bra006984.1-P	Field mustard	cytosol	29.2	25.38
Bra003125.1-P	Field mustard	cytosol	29.2	25.19
Zm00001d008420_P001	Maize	cytosol	37.17	17.87
Zm00001d021237_P001	Maize	cytosol	35.4	14.08
Zm00001d033729_P001	Maize	nucleus	40.71	12.57
Zm00001d027753_P001	Maize	nucleus	34.51	9.22
Zm00001d053311_P001	Maize	nucleus	22.12	7.31

Protein Annotations

EnsemblPlants:Bra025770.1	EnsemblPlants:Bra025770.1-P	EnsemblPlantsGene:Bra025770	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	SEG:seg	UniParc:UPI000253EEDE
UniProt:M4EAG2	MapMan:35.1	:	:	:	:

Description

AT1G19830 (E=9e-041) | auxin-responsive protein, putative

Coordinates

chrA06:+:7796443..7796784

Molecular Weight (calculated)

12877.7 Da

IEP (calculated)

7.674

GRAVY (calculated)

-0.125

Length

113 amino acids

Sequence
(BLAST)

001: MAIKTLTATM LTQTTTIKQI LKRYSSLGKK QSSEFNDKHD GQSLPLDVPK GHFVVYVGEN RVRYVLHISF LTRPEFKLLL QQAEEEFGFD HDMGLTIPCE
101: EVAFKSIVTS MLI

Best Arabidopsis Sequence Match ( AT1G19830.1 )
(BLAST)

001: MAIINRSKLT QTTMIKQILK RCSSLGKKQS SEYNDTHEHD GDSLPLDVPK GHFVVYVGGN RVRYVLPISF LTRPEFQLLL QQAEEEFGFD HNMGLTIPCE
101: EVAFKSLITS MLQPTYI

Arabidopsis Description

At1g19830 [Source:UniProtKB/TrEMBL;Acc:Q9FXI0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.