Factsheet for Bra024482.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	85.19	85.19
Bra039909.1-P	Field mustard	mitochondrion	84.26	84.26
AT2G18010.1	Thale cress	cytosol, plastid	83.33	80.36
Bra010501.1-P	Field mustard	mitochondrion	70.37	73.08
Bra011662.1-P	Field mustard	mitochondrion, plastid	68.52	71.15
Bra017747.1-P	Field mustard	mitochondrion, plastid	64.81	70.71
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	61.11	68.75
Bra034651.1-P	Field mustard	mitochondrion	65.74	68.27
PGSC0003DMT400075050	Potato	cytosol	60.19	67.71
Solyc03g033590.1.1	Tomato	mitochondrion	62.04	67.68
Bra011560.1-P	Field mustard	mitochondrion	66.67	67.29
KRH28787	Soybean	cytosol, mitochondrion	63.89	66.35
PGSC0003DMT400058186	Potato	cytosol	61.11	66.0
Bra017676.1-P	Field mustard	mitochondrion	64.81	65.42
PGSC0003DMT400009439	Potato	mitochondrion	60.19	64.36
Bra013061.1-P	Field mustard	mitochondrion	63.89	63.89
Solyc02g084010.1.1	Tomato	mitochondrion	60.19	63.73
VIT_04s0023g03230.t01	Wine grape	mitochondrion	61.11	63.46
KRH08093	Soybean	cytosol	62.04	63.21
Bra008207.1-P	Field mustard	cytosol, mitochondrion	55.56	63.16
KRH69796	Soybean	cytosol	62.04	62.62
Bra033581.1-P	Field mustard	mitochondrion	60.19	62.5
Bra015832.1-P	Field mustard	mitochondrion	62.04	62.04
Bra003746.1-P	Field mustard	mitochondrion	62.04	62.04
Bra011889.1-P	Field mustard	mitochondrion	60.19	61.9
Bra031171.1-P	Field mustard	mitochondrion	58.33	60.58
CDY20904	Canola	cytosol, extracellular	68.52	58.27
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	50.93	55.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	55.56	53.1
KRH76667	Soybean	cytosol, plastid	63.89	45.7
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	43.52	44.76
Bra000682.1-P	Field mustard	cytosol	26.85	29.59
Bra017211.1-P	Field mustard	mitochondrion	29.63	27.12
Bra009535.1-P	Field mustard	mitochondrion	26.85	27.1
Bra023093.1-P	Field mustard	cytosol	29.63	25.81
Bra028841.1-P	Field mustard	mitochondrion	25.93	25.23
Bra005223.1-P	Field mustard	cytosol	28.7	24.8
Bra003125.1-P	Field mustard	cytosol	28.7	23.66
Bra006984.1-P	Field mustard	cytosol	26.85	22.31

Protein Annotations

EnsemblPlants:Bra024482.1	EnsemblPlants:Bra024482.1-P	EnsemblPlantsGene:Bra024482	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF41	PFAM:PF02519	SEG:seg	UniParc:UPI000253EF98
UniProt:M4E6S7	MapMan:35.1	:	:	:	:

Description

AT2G18010 (E=4e-041) | auxin-responsive family protein

Coordinates

chrA06:-:16092708..16093034

Molecular Weight (calculated)

12443.1 Da

IEP (calculated)

8.804

GRAVY (calculated)

-0.329

Length

108 amino acids

Sequence
(BLAST)

001: MAIKKSSQAA SIKKILKRCS SSLGKNKNVT DCYYKQEDGL PQDVPKGHFP VYVGPNRSRY IIPISWLEYS EFQTLLRLAE EEYGFDHNMG VIIPCDEVFF
101: KSLISMFR

Best Arabidopsis Sequence Match ( AT2G18010.1 )
(BLAST)

001: MAIKRSSKAT SSQAASIKQI VKRCSSLRKM KNVNGCYYNQ EDDLPQDVPK GHFPVYVGPN RSRYIVPISW LHHSEFQTLL RLAEEEFGFD HDMGLTIPCD
101: EVFFRSLISM FR

Arabidopsis Description

Putative auxin-regulated protein [Source:UniProtKB/TrEMBL;Acc:Q9SL45]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.