Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 85.71 | 88.89 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 85.71 | 88.89 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 85.71 | 88.89 |
| Bra037243.1-P | Field mustard | cytosol, mitochondrion, nucleus | 85.71 | 88.89 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 84.82 | 87.96 |
| Bra039909.1-P | Field mustard | mitochondrion | 84.82 | 87.96 |
| Bra024482.1-P | Field mustard | mitochondrion | 80.36 | 83.33 |
| AT4G36110.1 | Thale cress | mitochondrion | 74.11 | 79.81 |
| AT4G34760.1 | Thale cress | mitochondrion | 70.54 | 73.83 |
| AT2G21220.1 | Thale cress | mitochondrion | 66.96 | 72.12 |
| KRH28787 | Soybean | cytosol, mitochondrion | 66.96 | 72.12 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 63.39 | 71.72 |
| AT4G38860.1 | Thale cress | mitochondrion | 66.96 | 71.43 |
| AT2G16580.1 | Thale cress | mitochondrion | 68.75 | 71.3 |
| KRH08093 | Soybean | cytosol | 66.96 | 70.75 |
| KRH69796 | Soybean | cytosol | 66.96 | 70.09 |
| PGSC0003DMT400058186 | Potato | cytosol | 62.5 | 70.0 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 64.29 | 69.23 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 58.93 | 68.75 |
| PGSC0003DMT400075050 | Potato | cytosol | 58.04 | 67.71 |
| AT1G75580.1 | Thale cress | mitochondrion | 65.18 | 67.59 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 58.04 | 64.36 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 58.04 | 63.73 |
| AT1G19830.1 | Thale cress | mitochondrion | 64.29 | 61.54 |
| AT5G66260.1 | Thale cress | cytosol | 50.0 | 56.57 |
| CDY20904 | Canola | cytosol, extracellular | 59.82 | 52.76 |
| KRH76667 | Soybean | cytosol, plastid | 66.07 | 49.01 |
| AT3G51200.1 | Thale cress | nucleus | 45.54 | 48.11 |
| AT4G09530.1 | Thale cress | cytosol | 27.68 | 30.1 |
| AT2G37030.1 | Thale cress | cytosol | 30.36 | 27.42 |
| AT5G03310.1 | Thale cress | mitochondrion | 25.89 | 25.44 |
| AT3G53250.2 | Thale cress | endoplasmic reticulum, extracellular | 27.68 | 20.0 |
Protein Annotations
| EntrezGene:28718283 | MapMan:35.1 | UniProt:A0A178VPI9 | ProteinID:AAD20125.1 | ProteinID:AEC06715.1 | ArrayExpress:AT2G18010 |
| EnsemblPlantsGene:AT2G18010 | RefSeq:AT2G18010 | TAIR:AT2G18010 | RefSeq:AT2G18010-TAIR-G | EnsemblPlants:AT2G18010.1 | TAIR:AT2G18010.1 |
| GO:GO:0003674 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009641 | GO:GO:0009653 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009741 | GO:GO:0009987 | GO:GO:0010202 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0040007 | GO:GO:0051510 | GO:GO:0060560 | RefSeq:NP_001318243.1 | ProteinID:OAP07734.1 | PFAM:PF02519 |
| PO:PO:0007616 | PO:PO:0009030 | PO:PO:0009031 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF41 | UniProt:Q9SL45 |
| InterPro:SAUR_fam | UniParc:UPI00000A1D76 | : | : | : | : |
Description
Putative auxin-regulated protein [Source:UniProtKB/TrEMBL;Acc:Q9SL45]
Coordinates
chr2:+:7833782..7834653
Molecular Weight (calculated)
12942.6 Da
IEP (calculated)
8.854
GRAVY (calculated)
-0.393
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIKRSSKAT SSQAASIKQI VKRCSSLRKM KNVNGCYYNQ EDDLPQDVPK GHFPVYVGPN RSRYIVPISW LHHSEFQTLL RLAEEEFGFD HDMGLTIPCD
101: EVFFRSLISM FR
101: EVFFRSLISM FR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.