Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036830.1-P | Field mustard | cytosol, mitochondrion, nucleus | 62.26 | 62.86 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 60.38 | 62.14 |
| AT5G66260.1 | Thale cress | cytosol | 52.83 | 56.57 |
| AT4G36110.1 | Thale cress | mitochondrion | 51.89 | 52.88 |
| AT4G34760.1 | Thale cress | mitochondrion | 51.89 | 51.4 |
| AT4G38860.1 | Thale cress | mitochondrion | 50.0 | 50.48 |
| AT2G21220.1 | Thale cress | mitochondrion | 48.11 | 49.04 |
| AT2G16580.1 | Thale cress | mitochondrion | 48.11 | 47.22 |
| AT1G75580.1 | Thale cress | mitochondrion | 47.17 | 46.3 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 48.11 | 45.54 |
| AT1G19830.1 | Thale cress | mitochondrion | 46.23 | 41.88 |
| AT4G09530.1 | Thale cress | cytosol | 26.42 | 27.18 |
| AT2G37030.1 | Thale cress | cytosol | 31.13 | 26.61 |
| AT5G03310.1 | Thale cress | mitochondrion | 28.3 | 26.32 |
| AT3G53250.2 | Thale cress | endoplasmic reticulum, extracellular | 30.19 | 20.65 |
Protein Annotations
| ArrayExpress:AT3G51200 | EnsemblPlants:AT3G51200.1 | EnsemblPlantsGene:AT3G51200 | EntrezGene:824283 | GO:GO:0003674 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF35 | PFAM:PF02519 |
| ProteinID:AEE78762.1 | ProteinID:CAB62642.1 | RefSeq:AT3G51200 | RefSeq:AT3G51200-TAIR-G | RefSeq:NP_190688.1 | TAIR:AT3G51200 |
| TAIR:AT3G51200.1 | UniParc:UPI00000AAB66 | UniProt:Q9SD26 | MapMan:35.1 | : | : |
Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9SD26]
Coordinates
chr3:-:19018738..19019173
Molecular Weight (calculated)
12311.8 Da
IEP (calculated)
9.573
GRAVY (calculated)
-0.625
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIKEASKTQ RERRGASSLK QMLMKRCSSF VKKSNEEDVP KKGYFAVYVG HFRDRHVIPI TSLNHPTFKM MLQKSEEEFG FRQESGLTIP CDQNTFLTLL
101: DSITSY
101: DSITSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.