Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78160 | Canola | cytosol | 70.97 | 84.62 |
| Bra006984.1-P | Field mustard | cytosol | 70.97 | 84.62 |
| CDX73568 | Canola | cytosol | 69.68 | 83.08 |
| AT2G37030.1 | Thale cress | cytosol | 54.19 | 67.74 |
| Solyc09g007970.1.1 | Tomato | cytosol | 41.94 | 53.72 |
| PGSC0003DMT400055533 | Potato | cytosol | 41.94 | 53.72 |
| PGSC0003DMT400080544 | Potato | cytosol | 41.94 | 53.28 |
| Solyc10g086200.1.1 | Tomato | cytosol | 41.94 | 52.85 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 41.94 | 52.42 |
| KRH19939 | Soybean | cytosol | 40.65 | 51.22 |
| KRH32539 | Soybean | cytosol | 40.0 | 49.6 |
| KRH67711 | Soybean | cytosol | 32.26 | 47.17 |
| KRG95997 | Soybean | mitochondrion | 36.77 | 45.6 |
| AT5G03310.1 | Thale cress | mitochondrion | 32.9 | 44.74 |
| Zm00001d003018_P001 | Maize | mitochondrion | 28.39 | 34.65 |
| AT5G66260.1 | Thale cress | cytosol | 21.94 | 34.34 |
| AT4G38860.1 | Thale cress | mitochondrion | 22.58 | 33.33 |
| OQU81983 | Sorghum | mitochondrion | 27.1 | 33.33 |
| AT2G21220.1 | Thale cress | mitochondrion | 21.94 | 32.69 |
| AT1G75580.1 | Thale cress | mitochondrion | 22.58 | 32.41 |
| Os04t0517900-01 | Rice | mitochondrion | 26.45 | 31.78 |
| AT4G34760.1 | Thale cress | mitochondrion | 21.94 | 31.78 |
| AT2G16580.1 | Thale cress | mitochondrion | 21.29 | 30.56 |
| AT3G51200.1 | Thale cress | nucleus | 20.65 | 30.19 |
| AT4G36110.1 | Thale cress | mitochondrion | 20.0 | 29.81 |
| AT1G19830.1 | Thale cress | mitochondrion | 21.29 | 28.21 |
| AT4G09530.1 | Thale cress | cytosol | 18.71 | 28.16 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 20.0 | 27.68 |
| TraesCS2B01G398600.1 | Wheat | cytosol, plastid | 25.81 | 26.49 |
| GSMUA_Achr1P09150_001 | Banana | nucleus | 32.26 | 26.18 |
| HORVU2Hr1G089400.1 | Barley | plastid | 26.45 | 26.11 |
| TraesCS2A01G381300.1 | Wheat | plastid | 25.81 | 25.97 |
| TraesCS2D01G377800.1 | Wheat | plastid | 25.16 | 25.16 |
Protein Annotations
| ArrayExpress:AT3G53250 | EnsemblPlants:AT3G53250.2 | EnsemblPlantsGene:AT3G53250 | EntrezGene:28719402 | GO:GO:0003674 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF9 | PFAM:PF02519 |
| ProteinID:AEE79054.2 | ProteinID:ANM64808.1 | ProteinID:OAP02865.1 | RefSeq:AT3G53250 | RefSeq:AT3G53250-TAIR-G | RefSeq:NP_001326813.1 |
| RefSeq:NP_190893.2 | TAIR:AT3G53250 | UniParc:UPI000848C5FC | UniProt:A0A1I9LQF0 | MapMan:35.2 | : |
Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQF0]
Coordinates
chr3:+:19742687..19743583
Molecular Weight (calculated)
17791.8 Da
IEP (calculated)
8.804
GRAVY (calculated)
-0.046
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFTIVLLIT KPSLSLFYSS FIFETSHSIL KMKNKFIKSC ENKFRIMKSK SIVLPCCTSS CESCCDKVSW GFKKENEAIP KDVPRGHLVV YVGDDYKRFV
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.