Factsheet for PGSC0003DMT400080544

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g086200.1.1	Tomato	cytosol	97.54	96.75
PGSC0003DMT400055533	Potato	cytosol	72.13	72.73
VIT_08s0040g01670.t01	Wine grape	mitochondrion	63.11	62.1
KRH67711	Soybean	cytosol	47.54	54.72
KRH19939	Soybean	cytosol	54.92	54.47
AT2G37030.1	Thale cress	cytosol	54.1	53.23
KRH32539	Soybean	cytosol	54.1	52.8
CDY13307	Canola	cytosol	56.56	52.67
Bra006984.1-P	Field mustard	cytosol	55.74	52.31
CDX78160	Canola	cytosol	55.74	52.31
CDX67565	Canola	cytosol	55.74	51.91
Bra003125.1-P	Field mustard	cytosol	55.74	51.91
CDX73568	Canola	cytosol	54.92	51.54
Bra017211.1-P	Field mustard	mitochondrion	49.18	50.85
CDY18466	Canola	cytosol, mitochondrion	49.18	50.85
Bra023093.1-P	Field mustard	cytosol	50.82	50.0
CDY46750	Canola	cytosol	50.82	50.0
CDX91329	Canola	cytosol	50.82	49.6
KRG95997	Soybean	mitochondrion	50.82	49.6
CDX79712	Canola	cytosol	50.0	49.19
Bra005223.1-P	Field mustard	cytosol	50.0	48.8
CDX74993	Canola	cytosol	50.0	48.8
Bra009535.1-P	Field mustard	mitochondrion	38.52	43.93
CDX70314	Canola	mitochondrion	38.52	43.93
CDY10388	Canola	mitochondrion	37.7	42.99
AT5G03310.1	Thale cress	mitochondrion	39.34	42.11
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	53.28	41.94
Bra028841.1-P	Field mustard	mitochondrion	37.7	41.44
CDY62892	Canola	mitochondrion	37.7	41.44
CDY44355	Canola	mitochondrion	36.89	40.54
PGSC0003DMT400075050	Potato	cytosol	30.33	38.54
PGSC0003DMT400058186	Potato	cytosol	31.15	38.0
PGSC0003DMT400004186	Potato	mitochondrion	27.87	35.42
Os04t0517900-01	Rice	mitochondrion	36.89	34.88
PGSC0003DMT400009439	Potato	mitochondrion	28.69	34.65
OQU81983	Sorghum	mitochondrion	34.43	33.33
PGSC0003DMT400004089	Potato	cytosol	27.05	32.67
PGSC0003DMT400009665	Potato	mitochondrion	28.69	32.41
Zm00001d003018_P001	Maize	mitochondrion	32.79	31.5
PGSC0003DMT400004187	Potato	mitochondrion	27.05	31.43
PGSC0003DMT400067154	Potato	cytosol	27.05	31.43
PGSC0003DMT400004090	Potato	mitochondrion	27.05	31.43
PGSC0003DMT400004165	Potato	mitochondrion	27.05	31.13
PGSC0003DMT400087067	Potato	mitochondrion	27.87	30.91
PGSC0003DMT400004167	Potato	mitochondrion	27.05	30.56
PGSC0003DMT400068694	Potato	mitochondrion	27.05	30.28
TraesCS2B01G398600.1	Wheat	cytosol, plastid	32.79	26.49
TraesCS2D01G377800.1	Wheat	plastid	32.79	25.81
TraesCS2A01G381300.1	Wheat	plastid	31.97	25.32
HORVU2Hr1G089400.1	Barley	plastid	31.15	24.2
GSMUA_Achr1P09150_001	Banana	nucleus	36.89	23.56

Protein Annotations

EnsemblPlants:PGSC0003DMT400080544	EnsemblPlantsGene:PGSC0003DMG400031363	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	PGSC:PGSC0003DMG400031363	UniParc:UPI0002969A21	UniProt:M1D3N0
MapMan:35.2	:	:	:	:	:

Description

Indole-3-acetic acid-induced protein ARG7 [Source:PGSC_GENE;Acc:PGSC0003DMG400031363]

Coordinates

chr10:+:51914210..51914578

Molecular Weight (calculated)

14221.5 Da

IEP (calculated)

8.754

GRAVY (calculated)

-0.146

Length

122 amino acids

Sequence
(BLAST)

001: MDGIFVKACQ KMGTKVITCA TNCDKCCMWT KWPFVQEDNN IPRDVPKGHL VVYVGKYQKR FVIKISLLKH PLFKALLDQA QEDFYDYNHV ESKLWIPCDE
101: NIFVSVIRCA TSPKNRRISI CF

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.