Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023093.1-P Field mustard cytosol 100.0 100.0
CDX79712 Canola cytosol 96.77 96.77
CDY18466 Canola cytosol, mitochondrion 81.45 85.59
CDX91329 Canola cytosol 85.48 84.8
CDX74993 Canola cytosol 84.68 84.0
AT2G37030.1 Thale cress cytosol 80.65 80.65
CDX73568 Canola cytosol 66.94 63.85
CDX78160 Canola cytosol 66.94 63.85
CDY13307 Canola cytosol 62.9 59.54
CDX67565 Canola cytosol 62.9 59.54
Solyc09g007970.1.1 Tomato cytosol 53.23 54.55
PGSC0003DMT400055533 Potato cytosol 53.23 54.55
KRH19939 Soybean cytosol 54.03 54.47
CDX70314 Canola mitochondrion 45.97 53.27
KRH32539 Soybean cytosol 53.23 52.8
VIT_08s0040g01670.t01 Wine grape mitochondrion 52.42 52.42
PGSC0003DMT400080544 Potato cytosol 50.0 50.82
CDY10388 Canola mitochondrion 43.55 50.47
Solyc10g086200.1.1 Tomato cytosol 50.0 50.41
KRH67711 Soybean cytosol 42.74 50.0
CDY62892 Canola mitochondrion 42.74 47.75
KRG95997 Soybean mitochondrion 47.58 47.2
CDY44355 Canola mitochondrion 41.94 46.85
OQU81983 Sorghum mitochondrion 41.13 40.48
Zm00001d003018_P001 Maize mitochondrion 38.71 37.8
CDX68122 Canola mitochondrion 31.45 36.11
CDX73181 Canola mitochondrion 31.45 36.11
CDY47511 Canola mitochondrion 31.45 36.11
Os04t0517900-01 Rice mitochondrion 37.1 35.66
CDY13831 Canola mitochondrion 29.84 35.58
CDX82007 Canola mitochondrion 29.84 35.58
CDY22408 Canola mitochondrion 29.84 35.58
CDX72733 Canola mitochondrion 29.84 35.58
CDY41947 Canola mitochondrion 29.84 35.24
CDY13560 Canola mitochondrion 30.65 35.19
CDX85905 Canola mitochondrion 30.65 35.19
CDY39041 Canola mitochondrion 30.65 35.19
CDY18596 Canola cytosol, mitochondrion, nucleus 28.23 35.0
CDX75460 Canola mitochondrion 29.84 34.58
CDY55152 Canola cytosol, mitochondrion 31.45 34.51
CDY42589 Canola mitochondrion 29.03 34.29
CDX81404 Canola cytosol, mitochondrion, nucleus 27.42 34.0
CDX69086 Canola mitochondrion 29.03 33.64
CDY29398 Canola cytosol, mitochondrion 30.65 33.63
CDY44482 Canola mitochondrion 30.65 33.63
CDY47053 Canola mitochondrion, plastid 26.61 33.33
CDX72576 Canola mitochondrion 26.61 33.33
CDX72500 Canola mitochondrion 27.42 31.78
CDY63257 Canola mitochondrion 27.42 31.78
CDY70461 Canola mitochondrion 27.42 31.78
CDX76303 Canola mitochondrion 27.42 31.78
CDX69199 Canola mitochondrion, plastid 26.61 31.73
CDY24829 Canola mitochondrion 26.61 31.73
CDY08909 Canola mitochondrion 26.61 31.73
CDX75553 Canola mitochondrion, plastid 26.61 31.73
CDY45331 Canola mitochondrion 26.61 30.84
CDX73741 Canola cytosol, mitochondrion, nucleus 25.0 30.1
CDY68553 Canola cytosol, mitochondrion, nucleus 25.81 29.63
CDY54551 Canola cytosol, mitochondrion, nucleus 25.0 28.7
CDY38169 Canola cytosol, mitochondrion, nucleus 25.0 28.7
CDY30334 Canola cytosol, mitochondrion, nucleus 25.0 28.7
CDX89731 Canola mitochondrion 25.0 28.7
TraesCS2A01G381300.1 Wheat plastid 35.48 28.57
TraesCS2B01G398600.1 Wheat cytosol, plastid 34.68 28.48
HORVU2Hr1G089400.1 Barley plastid 35.48 28.03
CDY02251 Canola mitochondrion 24.19 27.78
CDX90724 Canola cytosol 21.77 27.55
CDY05061 Canola cytosol 21.77 27.55
TraesCS2D01G377800.1 Wheat plastid 33.87 27.1
CDY20904 Canola cytosol, extracellular 24.19 23.62
GSMUA_Achr1P09150_001 Banana nucleus 36.29 23.56
Protein Annotations
EnsemblPlants:CDY46750EnsemblPlantsGene:GSBRNA2T00086072001GO:A0A078I770GO:GO:0008150GO:GO:0009719GO:GO:0009733
InterPro:SAUR_famPANTHER:PTHR31374PANTHER:PTHR31374:SF9PFAM:PF02519ProteinID:CDY46750ProteinID:CDY46750.1
UniParc:UPI000253FF87UniProt:A0A078I770MapMan:35.2:::
Description
BnaA03g16940DBnaA03g16940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I770]
Coordinates
chrLK032684:+:65717..66091
Molecular Weight (calculated)
14187.9 Da
IEP (calculated)
9.881
GRAVY (calculated)
0.020
Length
124 amino acids
Sequence
(BLAST)
001: MKSKFIKSCE KKLKMMTCKV IPPCTFCKTC CQRICWAFKK KAEVIPKDVP KGHLVVYVGE ESRRFVIKIS LLTHPLFKAL LDQAQDAYGF SADSRLWIPC
101: DVSTFLHVVR CAGAPRRQNK CMCI
Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)
001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI
Arabidopsis Description
Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.