Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47053 | Canola | mitochondrion, plastid | 97.98 | 97.98 |
| Bra017747.1-P | Field mustard | mitochondrion, plastid | 96.97 | 96.97 |
| CDY24829 | Canola | mitochondrion | 89.9 | 85.58 |
| CDY08909 | Canola | mitochondrion | 88.89 | 84.62 |
| AT4G36110.1 | Thale cress | mitochondrion | 86.87 | 82.69 |
| CDX69199 | Canola | mitochondrion, plastid | 85.86 | 81.73 |
| CDX75553 | Canola | mitochondrion, plastid | 85.86 | 81.73 |
| CDX72500 | Canola | mitochondrion | 74.75 | 69.16 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 71.72 | 68.27 |
| CDY63257 | Canola | mitochondrion | 73.74 | 68.22 |
| CDY70461 | Canola | mitochondrion | 73.74 | 68.22 |
| CDX76303 | Canola | mitochondrion | 73.74 | 68.22 |
| CDX75460 | Canola | mitochondrion | 72.73 | 67.29 |
| PGSC0003DMT400058186 | Potato | cytosol | 67.68 | 67.0 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 66.67 | 66.67 |
| CDX69086 | Canola | mitochondrion | 71.72 | 66.36 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 71.72 | 65.74 |
| PGSC0003DMT400075050 | Potato | cytosol | 63.64 | 65.62 |
| KRH28787 | Soybean | cytosol, mitochondrion | 68.69 | 65.38 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 70.71 | 64.81 |
| CDY41947 | Canola | mitochondrion | 68.69 | 64.76 |
| CDY42589 | Canola | mitochondrion | 68.69 | 64.76 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 62.63 | 64.58 |
| CDY45331 | Canola | mitochondrion | 69.7 | 64.49 |
| CDY13831 | Canola | mitochondrion | 67.68 | 64.42 |
| CDX82007 | Canola | mitochondrion | 67.68 | 64.42 |
| KRH08093 | Soybean | cytosol | 68.69 | 64.15 |
| KRH69796 | Soybean | cytosol | 68.69 | 63.55 |
| CDX68122 | Canola | mitochondrion | 68.69 | 62.96 |
| CDY47511 | Canola | mitochondrion | 68.69 | 62.96 |
| CDX73181 | Canola | mitochondrion | 68.69 | 62.96 |
| CDX72733 | Canola | mitochondrion | 65.66 | 62.5 |
| CDY22408 | Canola | mitochondrion | 65.66 | 62.5 |
| CDX85905 | Canola | mitochondrion | 67.68 | 62.04 |
| CDY13560 | Canola | mitochondrion | 67.68 | 62.04 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 67.68 | 62.04 |
| CDY39041 | Canola | mitochondrion | 67.68 | 62.04 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 67.68 | 62.04 |
| CDX89731 | Canola | mitochondrion | 66.67 | 61.11 |
| CDY02251 | Canola | mitochondrion | 66.67 | 61.11 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 61.62 | 60.4 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 61.62 | 59.8 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 57.58 | 57.0 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 56.57 | 56.0 |
| CDY44482 | Canola | mitochondrion | 63.64 | 55.75 |
| CDY55152 | Canola | cytosol, mitochondrion | 58.59 | 51.33 |
| CDY29398 | Canola | cytosol, mitochondrion | 58.59 | 51.33 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 49.49 | 47.57 |
| KRH76667 | Soybean | cytosol, plastid | 68.69 | 45.03 |
| CDY20904 | Canola | cytosol, extracellular | 48.48 | 37.8 |
| CDY05061 | Canola | cytosol | 32.32 | 32.65 |
| CDX90724 | Canola | cytosol | 32.32 | 32.65 |
| CDY18466 | Canola | cytosol, mitochondrion | 34.34 | 28.81 |
| CDY46750 | Canola | cytosol | 33.33 | 26.61 |
| CDX79712 | Canola | cytosol | 33.33 | 26.61 |
| CDX70314 | Canola | mitochondrion | 28.28 | 26.17 |
| CDY10388 | Canola | mitochondrion | 28.28 | 26.17 |
| CDX74993 | Canola | cytosol | 32.32 | 25.6 |
| CDX91329 | Canola | cytosol | 32.32 | 25.6 |
| CDX67565 | Canola | cytosol | 33.33 | 25.19 |
| CDY13307 | Canola | cytosol | 33.33 | 25.19 |
| CDY62892 | Canola | mitochondrion | 27.27 | 24.32 |
| CDY44355 | Canola | mitochondrion | 27.27 | 24.32 |
| CDX78160 | Canola | cytosol | 31.31 | 23.85 |
| CDX73568 | Canola | cytosol | 31.31 | 23.85 |
Protein Annotations
| EnsemblPlants:CDX72576 | EnsemblPlantsGene:GSBRNA2T00100114001 | GO:A0A078C6B8 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | PFAM:PF02519 | ProteinID:CDX72576 | ProteinID:CDX72576.1 |
| UniParc:UPI0004EE6586 | MapMan:35.1 | : | : | : | : |
Description
BnaC07g45980D
Coordinates
chrLK031796:+:1918600..1918899
Molecular Weight (calculated)
11224.7 Da
IEP (calculated)
9.193
GRAVY (calculated)
-0.174
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MVTKKSNKVS ACQAASLKKI LKRYSILGKK NQGNDVPKGH FPVYVGQHRS RYVVPISWLA HPEFQSLLQL AEEEFGFEHD MGLTIPCDEV VFQSLISMF
001: MAIKKSNKAA LSQAASLKQI LKRCSSLGKK NQGNCYFNDV PKGHFPVYVG QHRSRYVVPI SWLDHHEFQS LLQLAEEEFG FEHEMGLTIP CDEVVFRSLI
101: SMFR
101: SMFR
Arabidopsis Description
SAUR9 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.