CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000682.1-P	Field mustard	cytosol	100.0	100.0
CDY05061	Canola	cytosol	98.98	98.98
AT4G09530.1	Thale cress	cytosol	86.73	82.52
VIT_07s0130g00100.t01	Wine grape	cytosol	41.84	51.25
KRH63924	Soybean	cytosol	40.82	50.63
KRH54020	Soybean	cytosol	40.82	50.0
Solyc06g065220.1.1	Tomato	cytosol	46.94	47.42
PGSC0003DMT400067154	Potato	cytosol	47.96	44.76
CDY47511	Canola	mitochondrion	38.78	35.19
CDX73181	Canola	mitochondrion	38.78	35.19
CDY39041	Canola	mitochondrion	37.76	34.26
CDY13560	Canola	mitochondrion	37.76	34.26
CDX68122	Canola	mitochondrion	35.71	32.41
CDX85905	Canola	mitochondrion	35.71	32.41
CDY47053	Canola	mitochondrion, plastid	32.65	32.32
CDX72576	Canola	mitochondrion	32.65	32.32
CDY13831	Canola	mitochondrion	33.67	31.73
CDX82007	Canola	mitochondrion	33.67	31.73
CDY42589	Canola	mitochondrion	33.67	31.43
CDY18596	Canola	cytosol, mitochondrion, nucleus	31.63	31.0
CDY45331	Canola	mitochondrion	33.67	30.84
CDX75460	Canola	mitochondrion	33.67	30.84
CDX69199	Canola	mitochondrion, plastid	32.65	30.77
CDY08909	Canola	mitochondrion	32.65	30.77
CDY24829	Canola	mitochondrion	32.65	30.77
CDX75553	Canola	mitochondrion, plastid	32.65	30.77
CDX89731	Canola	mitochondrion	33.67	30.56
CDY02251	Canola	mitochondrion	33.67	30.56
CDY41947	Canola	mitochondrion	32.65	30.48
CDX81404	Canola	cytosol, mitochondrion, nucleus	30.61	30.0
CDX72500	Canola	mitochondrion	32.65	29.91
CDX76303	Canola	mitochondrion	32.65	29.91
CDX69086	Canola	mitochondrion	32.65	29.91
CDY63257	Canola	mitochondrion	32.65	29.91
CDY70461	Canola	mitochondrion	32.65	29.91
CDY22408	Canola	mitochondrion	31.63	29.81
CDX72733	Canola	mitochondrion	31.63	29.81
CDY54551	Canola	cytosol, mitochondrion, nucleus	32.65	29.63
CDY30334	Canola	cytosol, mitochondrion, nucleus	32.65	29.63
CDY38169	Canola	cytosol, mitochondrion, nucleus	31.63	28.7
CDY68553	Canola	cytosol, mitochondrion, nucleus	31.63	28.7
CDY44482	Canola	mitochondrion	32.65	28.32
CDY55152	Canola	cytosol, mitochondrion	30.61	26.55
CDY29398	Canola	cytosol, mitochondrion	29.59	25.66
CDX73741	Canola	cytosol, mitochondrion, nucleus	25.51	24.27
CDY18466	Canola	cytosol, mitochondrion	28.57	23.73
CDY46750	Canola	cytosol	27.55	21.77
CDX79712	Canola	cytosol	27.55	21.77
CDX91329	Canola	cytosol	27.55	21.6
CDX74993	Canola	cytosol	26.53	20.8
CDX78160	Canola	cytosol	27.55	20.77
CDX73568	Canola	cytosol	27.55	20.77
CDY20904	Canola	cytosol, extracellular	26.53	20.47
CDY13307	Canola	cytosol	26.53	19.85
CDX67565	Canola	cytosol	26.53	19.85
CDX70314	Canola	mitochondrion	21.43	19.63
CDY44355	Canola	mitochondrion	21.43	18.92
CDY62892	Canola	mitochondrion	21.43	18.92
CDY10388	Canola	mitochondrion	20.41	18.69

Protein Annotations

EnsemblPlants:CDX90724	EnsemblPlantsGene:GSBRNA2T00151407001	GO:A0A078DQJ4	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF55	PFAM:PF02519	ProteinID:CDX90724	ProteinID:CDX90724.1
UniParc:UPI00025402F2	MapMan:35.2	:	:	:	:

Description

BnaA03g24040D

Coordinates

chrLK031864:-:170470..170766

Molecular Weight (calculated)

11237.4 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.429

Length

98 amino acids

Sequence
(BLAST)

1: MPNKVADMHF HREEEEDAGA IRRSSSRTPR GHFVVYVGTK LERFVVPTRF LKSPSFQNLL EKAAEEFGYA EAHPNKIVLP CDVSTFRSLV MFLTSHDK

Best Arabidopsis Sequence Match ( AT4G09530.1 )
(BLAST)

001: MPHKVIDMHF HEREEEEDTG ESRSSSRTPR GHFVVYVGTK KKLERFVIPT TFLKSPSFQK LLDNAAEEFG YAEAHRDKIV LPCDVSTFRS LVMFLTSHQD
101: KSH

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M0P0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.