Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037178.1-P | Field mustard | cytosol, mitochondrion, nucleus | 98.0 | 98.0 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 98.0 | 98.0 |
| AT5G66260.1 | Thale cress | cytosol | 88.0 | 88.89 |
| CDY47053 | Canola | mitochondrion, plastid | 58.0 | 58.59 |
| CDY70461 | Canola | mitochondrion | 62.0 | 57.94 |
| CDY63257 | Canola | mitochondrion | 62.0 | 57.94 |
| CDX76303 | Canola | mitochondrion | 62.0 | 57.94 |
| CDY13831 | Canola | mitochondrion | 60.0 | 57.69 |
| CDX82007 | Canola | mitochondrion | 60.0 | 57.69 |
| CDY42589 | Canola | mitochondrion | 60.0 | 57.14 |
| CDY41947 | Canola | mitochondrion | 60.0 | 57.14 |
| CDX75460 | Canola | mitochondrion | 61.0 | 57.01 |
| CDX72576 | Canola | mitochondrion | 56.0 | 56.57 |
| CDX72500 | Canola | mitochondrion | 60.0 | 56.07 |
| CDX69086 | Canola | mitochondrion | 60.0 | 56.07 |
| CDY24829 | Canola | mitochondrion | 58.0 | 55.77 |
| CDY08909 | Canola | mitochondrion | 58.0 | 55.77 |
| CDY02251 | Canola | mitochondrion | 60.0 | 55.56 |
| CDY45331 | Canola | mitochondrion | 59.0 | 55.14 |
| CDY22408 | Canola | mitochondrion | 57.0 | 54.81 |
| CDX72733 | Canola | mitochondrion | 57.0 | 54.81 |
| CDX73181 | Canola | mitochondrion | 59.0 | 54.63 |
| CDX89731 | Canola | mitochondrion | 59.0 | 54.63 |
| CDY47511 | Canola | mitochondrion | 59.0 | 54.63 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 58.0 | 53.7 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 55.0 | 53.4 |
| CDX69199 | Canola | mitochondrion, plastid | 55.0 | 52.88 |
| CDX75553 | Canola | mitochondrion, plastid | 55.0 | 52.88 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 57.0 | 52.78 |
| CDY13560 | Canola | mitochondrion | 57.0 | 52.78 |
| CDY39041 | Canola | mitochondrion | 57.0 | 52.78 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 57.0 | 52.78 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 57.0 | 52.78 |
| CDX68122 | Canola | mitochondrion | 56.0 | 51.85 |
| CDX85905 | Canola | mitochondrion | 55.0 | 50.93 |
| CDY44482 | Canola | mitochondrion | 56.0 | 49.56 |
| CDY55152 | Canola | cytosol, mitochondrion | 53.0 | 46.9 |
| CDY29398 | Canola | cytosol, mitochondrion | 51.0 | 45.13 |
| CDY20904 | Canola | cytosol, extracellular | 42.0 | 33.07 |
| CDY05061 | Canola | cytosol | 30.0 | 30.61 |
| CDX90724 | Canola | cytosol | 30.0 | 30.61 |
| CDX70314 | Canola | mitochondrion | 31.0 | 28.97 |
| CDY10388 | Canola | mitochondrion | 30.0 | 28.04 |
| CDY18466 | Canola | cytosol, mitochondrion | 33.0 | 27.97 |
| CDY46750 | Canola | cytosol | 34.0 | 27.42 |
| CDX79712 | Canola | cytosol | 34.0 | 27.42 |
| CDX74993 | Canola | cytosol | 34.0 | 27.2 |
| CDY44355 | Canola | mitochondrion | 30.0 | 27.03 |
| CDY62892 | Canola | mitochondrion | 30.0 | 27.03 |
| CDX91329 | Canola | cytosol | 33.0 | 26.4 |
| CDX73568 | Canola | cytosol | 32.0 | 24.62 |
| CDX78160 | Canola | cytosol | 32.0 | 24.62 |
| CDY13307 | Canola | cytosol | 32.0 | 24.43 |
| CDX67565 | Canola | cytosol | 32.0 | 24.43 |
Protein Annotations
| EnsemblPlants:CDX81404 | EnsemblPlantsGene:GSBRNA2T00134986001 | GO:A0A078CZI7 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF35 | PFAM:PF02519 | ProteinID:CDX81404 | ProteinID:CDX81404.1 |
| UniParc:UPI0004EB7BBE | MapMan:35.1 | : | : | : | : |
Description
BnaC09g08150D
Coordinates
chrLK031824:-:1556645..1557223
Molecular Weight (calculated)
11196.6 Da
IEP (calculated)
9.292
GRAVY (calculated)
-0.181
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MGVERGSGKG LKQMLKRCSS LGKKSNVHVN SNGVPKGHFV VYVGLSRSRH IIPISFLTHP IFQMLLRQSE EEFGFYQDNG LTIPCDEDFF LSLISSINQP
1: MGVERGSGKG LKQMLKRCSS LGKKSSVDVN FNGVPKGHFV VYVGHSRSRH VIPISFLTHP IFQMLLQQSE EEFGFFQDNG LTIPCDEHFF RALISSINP
Arabidopsis Description
Auxin-induced protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FH62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.