CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025770.1-P	Field mustard	cytosol, mitochondrion	98.23	98.23
CDY55152	Canola	cytosol, mitochondrion	98.23	98.23
AT1G19830.1	Thale cress	mitochondrion	83.19	80.34
CDY44482	Canola	mitochondrion	77.88	77.88
CDX68122	Canola	mitochondrion	71.68	75.0
CDY47511	Canola	mitochondrion	70.8	74.07
CDX85905	Canola	mitochondrion	70.8	74.07
CDX73181	Canola	mitochondrion	70.8	74.07
CDY13560	Canola	mitochondrion	69.91	73.15
CDY39041	Canola	mitochondrion	69.03	72.22
VIT_18s0001g13980.t01	Wine grape	mitochondrion	65.49	71.15
KRH51719	Soybean	mitochondrion	61.95	70.0
KRH61056	Soybean	mitochondrion	61.95	70.0
GSMUA_Achr1P02500_001	Banana	mitochondrion	59.29	67.68
CDX76303	Canola	mitochondrion	63.72	67.29
CDY70461	Canola	mitochondrion	63.72	67.29
CDY63257	Canola	mitochondrion	63.72	67.29
CDY22408	Canola	mitochondrion	61.06	66.35
CDY13831	Canola	mitochondrion	61.06	66.35
CDX82007	Canola	mitochondrion	61.06	66.35
CDX72733	Canola	mitochondrion	61.06	66.35
GSMUA_Achr5P11350_001	Banana	mitochondrion	57.52	66.33
Solyc04g081270.1.1	Tomato	mitochondrion	62.83	65.74
CDY41947	Canola	mitochondrion	61.06	65.71
CDX75460	Canola	mitochondrion	61.95	65.42
CDY42589	Canola	mitochondrion	60.18	64.76
CDX69086	Canola	mitochondrion	61.06	64.49
GSMUA_Achr11P...	Banana	mitochondrion	58.41	64.08
CDX72500	Canola	mitochondrion	59.29	62.62
PGSC0003DMT400009665	Potato	mitochondrion	59.29	62.04
CDY45331	Canola	mitochondrion	58.41	61.68
GSMUA_Achr3P11290_001	Banana	mitochondrion	53.98	59.8
CDY08909	Canola	mitochondrion	54.87	59.62
CDY24829	Canola	mitochondrion	54.87	59.62
CDY02251	Canola	mitochondrion	56.64	59.26
CDX89731	Canola	mitochondrion	56.64	59.26
CDY47053	Canola	mitochondrion, plastid	51.33	58.59
CDX72576	Canola	mitochondrion	51.33	58.59
GSMUA_Achr1P19860_001	Banana	mitochondrion	53.98	57.55
CDY30334	Canola	cytosol, mitochondrion, nucleus	53.98	56.48
CDY38169	Canola	cytosol, mitochondrion, nucleus	53.98	56.48
CDY54551	Canola	cytosol, mitochondrion, nucleus	53.98	56.48
CDY68553	Canola	cytosol, mitochondrion, nucleus	53.98	56.48
CDX69199	Canola	mitochondrion, plastid	51.33	55.77
CDX75553	Canola	mitochondrion, plastid	51.33	55.77
GSMUA_Achr1P06110_001	Banana	mitochondrion	48.67	55.56
GSMUA_Achr7P06520_001	Banana	mitochondrion	49.56	54.37
CDY18596	Canola	cytosol, mitochondrion, nucleus	46.02	52.0
CDX81404	Canola	cytosol, mitochondrion, nucleus	45.13	51.0
Os02t0445600-01	Rice	cytosol, mitochondrion	43.36	50.52
Os02t0445100-01	Rice	mitochondrion	40.71	47.92
Zm00001d051802_P001	Maize	mitochondrion	47.79	46.96
Os06t0137400-00	Rice	mitochondrion	47.79	45.38
Zm00001d045423_P001	Maize	cytosol	49.56	44.8
KXG19242	Sorghum	mitochondrion	49.56	44.09
TraesCS4A01G375500.1	Wheat	mitochondrion	46.02	43.7
TraesCS7A01G077000.1	Wheat	mitochondrion	46.02	43.33
TraesCS7D01G072600.1	Wheat	mitochondrion	46.02	41.6
CDX73741	Canola	cytosol, mitochondrion, nucleus	36.28	39.81
Zm00001d004578_P001	Maize	plastid	38.05	34.68
CDY20904	Canola	cytosol, extracellular	38.05	33.86
CDY18466	Canola	cytosol, mitochondrion	33.63	32.2
CDY46750	Canola	cytosol	33.63	30.65
CDX79712	Canola	cytosol	33.63	30.65
Zm00001d051962_P001	Maize	cytosol	42.48	30.0
Zm00001d012222_P001	Maize	cytosol	39.82	30.0
CDY05061	Canola	cytosol	25.66	29.59
CDX90724	Canola	cytosol	25.66	29.59
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	46.02	28.89
CDX91329	Canola	cytosol	31.86	28.8
CDX74993	Canola	cytosol	31.86	28.8
CDX70314	Canola	mitochondrion	26.55	28.04
CDY10388	Canola	mitochondrion	25.66	27.1
CDY44355	Canola	mitochondrion	26.55	27.03
CDY62892	Canola	mitochondrion	25.66	26.13
CDX78160	Canola	cytosol	28.32	24.62
CDX73568	Canola	cytosol	28.32	24.62
CDY13307	Canola	cytosol	28.32	24.43
CDX67565	Canola	cytosol	28.32	24.43
Zm00001d008420_P001	Maize	cytosol	36.28	17.45
Zm00001d021237_P001	Maize	cytosol	35.4	14.08
Zm00001d033729_P001	Maize	nucleus	39.82	12.3
Zm00001d027753_P001	Maize	nucleus	34.51	9.22
Zm00001d053311_P001	Maize	nucleus	21.24	7.02

Protein Annotations

EnsemblPlants:CDY29398	EnsemblPlantsGene:GSBRNA2T00042991001	GO:A0A078GXR6	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY29398	ProteinID:CDY29398.1
SEG:seg	UniParc:UPI0004EE9404	UniProt:A0A078GXR6	MapMan:35.1	:	:

Description

BnaA06g13980DBnaA06g13980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXR6]

Coordinates

chrLK032236:-:324856..325197

Molecular Weight (calculated)

12937.8 Da

IEP (calculated)

7.674

GRAVY (calculated)

-0.105

Length

113 amino acids

Sequence
(BLAST)

001: MAIKTLTATM LTQTTMIKQI LKRYSSLGKK QSSEFNDKHD GQSLPLDVPK SHFVVYVGEN RVRYVLHISF LTRPEFKLLL QQAEEEFGFD HDMGLTIPCE
101: EVAFKSIVTS MLI

Best Arabidopsis Sequence Match ( AT1G19830.1 )
(BLAST)

001: MAIINRSKLT QTTMIKQILK RCSSLGKKQS SEYNDTHEHD GDSLPLDVPK GHFVVYVGGN RVRYVLPISF LTRPEFQLLL QQAEEEFGFD HNMGLTIPCE
101: EVAFKSLITS MLQPTYI

Arabidopsis Description

At1g19830 [Source:UniProtKB/TrEMBL;Acc:Q9FXI0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.