Factsheet for GSMUA_Achr1P06110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P06520_001	Banana	mitochondrion	81.82	78.64
GSMUA_Achr3P11290_001	Banana	mitochondrion	80.81	78.43
GSMUA_Achr1P19860_001	Banana	mitochondrion	79.8	74.53
GSMUA_Achr1P02500_001	Banana	mitochondrion	70.71	70.71
GSMUA_Achr5P11350_001	Banana	mitochondrion	68.69	69.39
KRH39815	Soybean	mitochondrion	72.73	69.23
KRH61056	Soybean	mitochondrion	68.69	68.0
KRH51719	Soybean	mitochondrion	68.69	68.0
GSMUA_Achr11P...	Banana	mitochondrion	70.71	67.96
KRH24349	Soybean	mitochondrion	71.72	67.62
VIT_03s0038g00950.t01	Wine grape	mitochondrion	70.71	67.31
KRH60748	Soybean	cytosol	71.72	66.98
KRH51448	Soybean	cytosol	71.72	66.98
PGSC0003DMT400004089	Potato	cytosol	67.68	66.34
VIT_18s0001g13980.t01	Wine grape	mitochondrion	68.69	65.38
Bra008207.1-P	Field mustard	cytosol, mitochondrion	61.62	64.21
CDY47511	Canola	mitochondrion	69.7	63.89
CDY39041	Canola	mitochondrion	69.7	63.89
CDY13560	Canola	mitochondrion	69.7	63.89
CDX73181	Canola	mitochondrion	69.7	63.89
Bra015832.1-P	Field mustard	mitochondrion	69.7	63.89
Solyc01g110570.2.1	Tomato	mitochondrion	66.67	62.86
PGSC0003DMT400004186	Potato	mitochondrion	60.61	62.5
Solyc01g110580.2.1	Tomato	mitochondrion	60.61	62.5
AT1G75580.1	Thale cress	mitochondrion	67.68	62.04
Bra003746.1-P	Field mustard	mitochondrion	67.68	62.04
CDX68122	Canola	mitochondrion	67.68	62.04
PGSC0003DMT400004187	Potato	mitochondrion	65.66	61.9
CDX85905	Canola	mitochondrion	66.67	61.11
Solyc04g081270.1.1	Tomato	mitochondrion	65.66	60.19
Solyc01g110590.2.1	Tomato	mitochondrion	63.64	60.0
PGSC0003DMT400004165	Potato	mitochondrion	63.64	59.43
PGSC0003DMT400009665	Potato	mitochondrion	64.65	59.26
Solyc10g054720.1.1	Tomato	mitochondrion	64.65	58.72
PGSC0003DMT400004167	Potato	mitochondrion	63.64	58.33
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	63.64	58.33
PGSC0003DMT400004090	Potato	mitochondrion	61.62	58.1
PGSC0003DMT400068694	Potato	mitochondrion	63.64	57.8
Solyc01g110620.1.1	Tomato	mitochondrion	60.61	57.14
Os02t0445600-01	Rice	cytosol, mitochondrion	52.53	53.61
AT1G19830.1	Thale cress	mitochondrion	62.63	52.99
PGSC0003DMT400087067	Potato	mitochondrion	58.59	52.73
CDY44482	Canola	mitochondrion	59.6	52.21
CDY55152	Canola	cytosol, mitochondrion	57.58	50.44
Zm00001d051802_P001	Maize	mitochondrion	58.59	50.43
Os02t0445100-01	Rice	mitochondrion	48.48	50.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	56.57	49.56
CDY29398	Canola	cytosol, mitochondrion	55.56	48.67
Os06t0137400-00	Rice	mitochondrion	57.58	47.9
TraesCS4A01G375500.1	Wheat	mitochondrion	55.56	46.22
TraesCS7A01G077000.1	Wheat	mitochondrion	55.56	45.83
KXG19242	Sorghum	mitochondrion	58.59	45.67
Zm00001d045423_P001	Maize	cytosol	57.58	45.6
TraesCS7D01G072600.1	Wheat	mitochondrion	55.56	44.0
Zm00001d004578_P001	Maize	plastid	46.46	37.1
Zm00001d012222_P001	Maize	cytosol	53.54	35.33
Zm00001d051962_P001	Maize	cytosol	51.52	31.88
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	54.55	30.0
GSMUA_Achr1P09150_001	Banana	nucleus	42.42	21.99
Zm00001d008420_P001	Maize	cytosol	41.41	17.45
Zm00001d021237_P001	Maize	cytosol	40.4	14.08
Zm00001d033729_P001	Maize	nucleus	50.51	13.66
Zm00001d027753_P001	Maize	nucleus	40.4	9.46
Zm00001d053311_P001	Maize	nucleus	22.22	6.43

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06110_001	EnsemblPlants:GSMUA_Achr1T06110_001	EnsemblPlantsGene:GSMUA_Achr1G06110_001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF35	PFAM:PF02519	UniParc:UPI000294DFF7	UniProt:M0RXG9
MapMan:35.1	:	:	:	:	:

Description

Auxin-induced protein 6B [Source:GMGC_GENE;Acc:GSMUA_Achr1G06110_001]

Coordinates

chr1:-:4909486..4909785

Molecular Weight (calculated)

11180.7 Da

IEP (calculated)

10.475

GRAVY (calculated)

-0.273

Length

99 amino acids

Sequence
(BLAST)

1: MVVKKQSKLV QTQVLKQMLK RCSSSGRGKG PPVDVPKGHF VVYVGTNRSR FIVPISYLDH PQFQGLLRQA EEEFGFHHHM GLTIPCDETV FRSLTSALK

Best Arabidopsis Sequence Match ( AT2G21220.1 )
(BLAST)

001: MAVKRSSKLT QTAMLKQILK RCSSLAKNQC YDEDGLPVDV PKGHFPVYVG EKRSRYIVPI SFLTHPKFKS LLQQAEEEFG FNHDMGLTIP CEEVVFRSLT
101: SMIG

Arabidopsis Description

Putative auxin-regulated protein [Source:UniProtKB/TrEMBL;Acc:Q9SIG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.