Factsheet for Bra003746.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68122	Canola	mitochondrion	100.0	100.0
CDX85905	Canola	mitochondrion	99.07	99.07
Bra015832.1-P	Field mustard	mitochondrion	93.52	93.52
AT1G75580.1	Thale cress	mitochondrion	92.59	92.59
Bra008207.1-P	Field mustard	cytosol, mitochondrion	79.63	90.53
VIT_18s0001g13980.t01	Wine grape	mitochondrion	80.56	83.65
KRH61056	Soybean	mitochondrion	73.15	79.0
KRH51719	Soybean	mitochondrion	73.15	79.0
Bra033581.1-P	Field mustard	mitochondrion	74.07	76.92
GSMUA_Achr1P02500_001	Banana	mitochondrion	70.37	76.77
GSMUA_Achr5P11350_001	Banana	mitochondrion	69.44	76.53
Bra034651.1-P	Field mustard	mitochondrion	73.15	75.96
Bra011889.1-P	Field mustard	mitochondrion	73.15	75.24
Bra031171.1-P	Field mustard	mitochondrion	72.22	75.0
Bra011560.1-P	Field mustard	mitochondrion	74.07	74.77
Solyc04g081270.1.1	Tomato	mitochondrion	74.07	74.07
GSMUA_Achr11P...	Banana	mitochondrion	70.37	73.79
GSMUA_Achr3P11290_001	Banana	mitochondrion	68.52	72.55
Bra025770.1-P	Field mustard	cytosol, mitochondrion	75.0	71.68
Bra017676.1-P	Field mustard	mitochondrion	70.37	71.03
Bra017747.1-P	Field mustard	mitochondrion, plastid	64.81	70.71
PGSC0003DMT400009665	Potato	mitochondrion	70.37	70.37
Bra011662.1-P	Field mustard	mitochondrion, plastid	65.74	68.27
Bra010501.1-P	Field mustard	mitochondrion	65.74	68.27
GSMUA_Achr7P06520_001	Banana	mitochondrion	64.81	67.96
GSMUA_Achr1P19860_001	Banana	mitochondrion	66.67	67.92
GSMUA_Achr1P06110_001	Banana	mitochondrion	62.04	67.68
Bra013061.1-P	Field mustard	mitochondrion	65.74	65.74
Bra039909.1-P	Field mustard	mitochondrion	62.96	62.96
Bra024482.1-P	Field mustard	mitochondrion	62.04	62.04
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	62.04	62.04
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	52.78	57.0
Zm00001d051802_P001	Maize	mitochondrion	60.19	56.52
Os02t0445100-01	Rice	mitochondrion	49.07	55.21
Os06t0137400-00	Rice	mitochondrion	59.26	53.78
Os02t0445600-01	Rice	cytosol, mitochondrion	48.15	53.61
Zm00001d045423_P001	Maize	cytosol	59.26	51.2
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	49.07	50.48
TraesCS4A01G375500.1	Wheat	mitochondrion	55.56	50.42
KXG19242	Sorghum	mitochondrion	59.26	50.39
TraesCS7A01G077000.1	Wheat	mitochondrion	55.56	50.0
TraesCS7D01G072600.1	Wheat	mitochondrion	55.56	48.0
Zm00001d004578_P001	Maize	plastid	48.15	41.94
Zm00001d012222_P001	Maize	cytosol	51.85	37.33
Bra000682.1-P	Field mustard	cytosol	32.41	35.71
Zm00001d051962_P001	Maize	cytosol	51.85	35.0
Bra009535.1-P	Field mustard	mitochondrion	34.26	34.58
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	54.63	32.78
Bra017211.1-P	Field mustard	mitochondrion	35.19	32.2
Bra023093.1-P	Field mustard	cytosol	36.11	31.45
Bra005223.1-P	Field mustard	cytosol	36.11	31.2
Bra028841.1-P	Field mustard	mitochondrion	31.48	30.63
Bra006984.1-P	Field mustard	cytosol	33.33	27.69
Bra003125.1-P	Field mustard	cytosol	32.41	26.72
Zm00001d008420_P001	Maize	cytosol	39.81	18.3
Zm00001d021237_P001	Maize	cytosol	39.81	15.14
Zm00001d033729_P001	Maize	nucleus	49.07	14.48
Zm00001d027753_P001	Maize	nucleus	41.67	10.64
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:Bra003746.1	EnsemblPlants:Bra003746.1-P	EnsemblPlantsGene:Bra003746	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	SEG:seg	UniParc:UPI00025415C8
UniProt:M4CHR3	MapMan:35.1	:	:	:	:

Description

AT1G75580 (E=5e-043) | auxin-responsive protein, putative

Coordinates

chrA07:-:14824315..14824641

Molecular Weight (calculated)

12273.9 Da

IEP (calculated)

6.248

GRAVY (calculated)

-0.306

Length

108 amino acids

Sequence
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NEYSEDENGH PLDVPKGHFV VYVGENRVRY VVPISLLTRP EFQLLLQQAE EEFGFDHEMG LTIPCEEVVF
101: QSLTSMLG

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.