Factsheet for GSMUA_Achr1P19860_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P11290_001	Banana	mitochondrion	83.02	86.27
GSMUA_Achr7P06520_001	Banana	mitochondrion	80.19	82.52
GSMUA_Achr1P06110_001	Banana	mitochondrion	74.53	79.8
GSMUA_Achr1P02500_001	Banana	mitochondrion	68.87	73.74
GSMUA_Achr5P11350_001	Banana	mitochondrion	67.92	73.47
KRH24349	Soybean	mitochondrion	72.64	73.33
VIT_18s0001g13980.t01	Wine grape	mitochondrion	71.7	73.08
GSMUA_Achr11P...	Banana	mitochondrion	70.75	72.82
KRH51448	Soybean	cytosol	72.64	72.64
KRH60748	Soybean	cytosol	72.64	72.64
KRH39815	Soybean	mitochondrion	70.75	72.12
VIT_03s0038g00950.t01	Wine grape	mitochondrion	69.81	71.15
KRH51719	Soybean	mitochondrion	66.98	71.0
KRH61056	Soybean	mitochondrion	66.98	71.0
CDY47511	Canola	mitochondrion	68.87	67.59
CDX73181	Canola	mitochondrion	68.87	67.59
Bra015832.1-P	Field mustard	mitochondrion	68.87	67.59
Bra008207.1-P	Field mustard	cytosol, mitochondrion	60.38	67.37
CDY39041	Canola	mitochondrion	67.92	66.67
CDY13560	Canola	mitochondrion	67.92	66.67
CDX68122	Canola	mitochondrion	67.92	66.67
Solyc01g110570.2.1	Tomato	mitochondrion	66.04	66.67
Bra003746.1-P	Field mustard	mitochondrion	67.92	66.67
AT1G75580.1	Thale cress	mitochondrion	67.92	66.67
PGSC0003DMT400004089	Potato	cytosol	63.21	66.34
Solyc04g081270.1.1	Tomato	mitochondrion	66.98	65.74
PGSC0003DMT400009665	Potato	mitochondrion	66.98	65.74
CDX85905	Canola	mitochondrion	66.98	65.74
PGSC0003DMT400004187	Potato	mitochondrion	65.09	65.71
Solyc01g110580.2.1	Tomato	mitochondrion	57.55	63.54
PGSC0003DMT400004186	Potato	mitochondrion	57.55	63.54
PGSC0003DMT400004165	Potato	mitochondrion	63.21	63.21
PGSC0003DMT400004167	Potato	mitochondrion	63.21	62.04
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	63.21	62.04
Solyc10g054720.1.1	Tomato	mitochondrion	63.21	61.47
Solyc01g110590.2.1	Tomato	mitochondrion	60.38	60.95
PGSC0003DMT400068694	Potato	mitochondrion	62.26	60.55
PGSC0003DMT400004090	Potato	mitochondrion	59.43	60.0
Solyc01g110620.1.1	Tomato	mitochondrion	59.43	60.0
CDY44482	Canola	mitochondrion	63.21	59.29
Zm00001d051802_P001	Maize	mitochondrion	64.15	59.13
Os02t0445600-01	Rice	cytosol, mitochondrion	53.77	58.76
AT1G19830.1	Thale cress	mitochondrion	63.21	57.27
Os06t0137400-00	Rice	mitochondrion	64.15	57.14
CDY55152	Canola	cytosol, mitochondrion	59.43	55.75
Bra025770.1-P	Field mustard	cytosol, mitochondrion	58.49	54.87
CDY29398	Canola	cytosol, mitochondrion	57.55	53.98
TraesCS4A01G375500.1	Wheat	mitochondrion	60.38	53.78
PGSC0003DMT400087067	Potato	mitochondrion	55.66	53.64
Zm00001d045423_P001	Maize	cytosol	63.21	53.6
KXG19242	Sorghum	mitochondrion	64.15	53.54
TraesCS7A01G077000.1	Wheat	mitochondrion	60.38	53.33
Os02t0445100-01	Rice	mitochondrion	48.11	53.12
TraesCS7D01G072600.1	Wheat	mitochondrion	60.38	51.2
Zm00001d004578_P001	Maize	plastid	50.0	42.74
Zm00001d012222_P001	Maize	cytosol	56.6	40.0
Zm00001d051962_P001	Maize	cytosol	56.6	37.5
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	59.43	35.0
GSMUA_Achr1P09150_001	Banana	nucleus	40.57	22.51
Zm00001d008420_P001	Maize	cytosol	42.45	19.15
Zm00001d021237_P001	Maize	cytosol	42.45	15.85
Zm00001d033729_P001	Maize	nucleus	52.83	15.3
Zm00001d027753_P001	Maize	nucleus	43.4	10.87
Zm00001d053311_P001	Maize	nucleus	24.53	7.6

Protein Annotations

EnsemblPlants:GSMUA_Achr1P19860_001	EnsemblPlants:GSMUA_Achr1T19860_001	EnsemblPlantsGene:GSMUA_Achr1G19860_001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	SEG:seg	UniParc:UPI000296EE72
UniProt:M0S1E4	MapMan:35.1	:	:	:	:

Description

OsSAUR24 - Auxin-responsive SAUR gene family member [Source:GMGC_GENE;Acc:GSMUA_Achr1G19860_001]

Coordinates

chr1:+:14904772..14905092

Molecular Weight (calculated)

11956.4 Da

IEP (calculated)

8.247

GRAVY (calculated)

-0.353

Length

106 amino acids

Sequence
(BLAST)

001: MAVKKQNKVG QTAVLKQILK RCSSLGREGK KEEEDEGLPV DVPRGHFVVY VGDNRSRFIV PISYLARPEF QSLLRQAEDE FGFHHHMGLT IPCDEVAFRS
101: LTSALT

Best Arabidopsis Sequence Match ( AT1G19830.1 )
(BLAST)

001: MAIINRSKLT QTTMIKQILK RCSSLGKKQS SEYNDTHEHD GDSLPLDVPK GHFVVYVGGN RVRYVLPISF LTRPEFQLLL QQAEEEFGFD HNMGLTIPCE
101: EVAFKSLITS MLQPTYI

Arabidopsis Description

At1g19830 [Source:UniProtKB/TrEMBL;Acc:Q9FXI0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.