Factsheet for Solyc10g054720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068694	Potato	mitochondrion	95.41	95.41
VIT_03s0038g00950.t01	Wine grape	mitochondrion	81.65	85.58
Solyc01g110570.2.1	Tomato	mitochondrion	80.73	83.81
Solyc01g110590.2.1	Tomato	mitochondrion	77.98	80.95
Solyc01g110620.1.1	Tomato	mitochondrion	77.06	80.0
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	78.9	79.63
Solyc04g081270.1.1	Tomato	mitochondrion	77.98	78.7
KRH60748	Soybean	cytosol	76.15	78.3
KRH51448	Soybean	cytosol	76.15	78.3
GSMUA_Achr1P02500_001	Banana	mitochondrion	70.64	77.78
GSMUA_Achr5P11350_001	Banana	mitochondrion	69.72	77.55
Solyc01g110580.2.1	Tomato	mitochondrion	67.89	77.08
KRH24349	Soybean	mitochondrion	73.39	76.19
KRH39815	Soybean	mitochondrion	72.48	75.96
GSMUA_Achr11P...	Banana	mitochondrion	70.64	74.76
Solyc03g033590.1.1	Tomato	mitochondrion	65.14	71.72
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	60.55	68.75
GSMUA_Achr3P11290_001	Banana	mitochondrion	63.3	67.65
GSMUA_Achr7P06520_001	Banana	mitochondrion	61.47	65.05
GSMUA_Achr1P06110_001	Banana	mitochondrion	58.72	64.65
Solyc02g084010.1.1	Tomato	mitochondrion	59.63	63.73
GSMUA_Achr1P19860_001	Banana	mitochondrion	61.47	63.21
Os02t0445600-01	Rice	cytosol, mitochondrion	53.21	59.79
Os02t0445100-01	Rice	mitochondrion	47.71	54.17
Os06t0137400-00	Rice	mitochondrion	57.8	52.94
Zm00001d051802_P001	Maize	mitochondrion	55.05	52.17
KXG19242	Sorghum	mitochondrion	58.72	50.39
Zm00001d045423_P001	Maize	cytosol	56.88	49.6
TraesCS4A01G375500.1	Wheat	mitochondrion	53.21	48.74
TraesCS7A01G077000.1	Wheat	mitochondrion	53.21	48.33
TraesCS7D01G072600.1	Wheat	mitochondrion	53.21	46.4
Zm00001d004578_P001	Maize	plastid	46.79	41.13
Solyc06g065220.1.1	Tomato	cytosol	33.03	37.11
Zm00001d012222_P001	Maize	cytosol	47.71	34.67
Zm00001d051962_P001	Maize	cytosol	50.46	34.38
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	52.29	31.67
Solyc09g007970.1.1	Tomato	cytosol	31.19	28.1
Solyc10g086200.1.1	Tomato	cytosol	30.28	26.83
Zm00001d008420_P001	Maize	cytosol	38.53	17.87
Zm00001d021237_P001	Maize	cytosol	37.61	14.44
Zm00001d033729_P001	Maize	nucleus	46.79	13.93
Zm00001d027753_P001	Maize	nucleus	38.53	9.93
Zm00001d053311_P001	Maize	nucleus	21.1	6.73

Protein Annotations

EnsemblPlants:Solyc10g054720.1.1	EnsemblPlantsGene:Solyc10g054720.1	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	UniParc:UPI0002769306	UniProt:K4D165	MapMan:35.1

Description

No Description!

Coordinates

chr10:-:55785023..55785352

Molecular Weight (calculated)

12440.9 Da

IEP (calculated)

6.770

GRAVY (calculated)

-0.298

Length

109 amino acids

Sequence
(BLAST)

001: MAIRKSNKLS QSTMLKQILK RCSSLGRKNN SYDDAENSLP IDVPKGHFAV YVGENRTRYI VPISFLSYPE FQCLLHRAEE EFGFDHDMGI TIPCEEVVFQ
101: SLTSSMLGY

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.