Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055533 | Potato | cytosol | 98.35 | 98.35 |
| Solyc10g086200.1.1 | Tomato | cytosol | 76.86 | 75.61 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 66.94 | 65.32 |
| AT2G37030.1 | Thale cress | cytosol | 58.68 | 57.26 |
| KRH19939 | Soybean | cytosol | 57.02 | 56.1 |
| KRH67711 | Soybean | cytosol | 48.76 | 55.66 |
| KRH32539 | Soybean | cytosol | 57.02 | 55.2 |
| KRG95997 | Soybean | mitochondrion | 55.37 | 53.6 |
| Bra005223.1-P | Field mustard | cytosol | 55.37 | 53.6 |
| CDX74993 | Canola | cytosol | 55.37 | 53.6 |
| CDX91329 | Canola | cytosol | 55.37 | 53.6 |
| Bra023093.1-P | Field mustard | cytosol | 54.55 | 53.23 |
| CDX79712 | Canola | cytosol | 54.55 | 53.23 |
| CDY46750 | Canola | cytosol | 54.55 | 53.23 |
| Bra006984.1-P | Field mustard | cytosol | 57.02 | 53.08 |
| CDX78160 | Canola | cytosol | 57.02 | 53.08 |
| CDY13307 | Canola | cytosol | 57.02 | 52.67 |
| Bra017211.1-P | Field mustard | mitochondrion | 51.24 | 52.54 |
| CDY18466 | Canola | cytosol, mitochondrion | 51.24 | 52.54 |
| CDX73568 | Canola | cytosol | 56.2 | 52.31 |
| Bra003125.1-P | Field mustard | cytosol | 56.2 | 51.91 |
| CDX67565 | Canola | cytosol | 56.2 | 51.91 |
| CDX70314 | Canola | mitochondrion | 43.8 | 49.53 |
| Bra009535.1-P | Field mustard | mitochondrion | 43.8 | 49.53 |
| CDY10388 | Canola | mitochondrion | 42.98 | 48.6 |
| CDY62892 | Canola | mitochondrion | 43.8 | 47.75 |
| Bra028841.1-P | Field mustard | mitochondrion | 43.8 | 47.75 |
| CDY44355 | Canola | mitochondrion | 42.98 | 46.85 |
| AT5G03310.1 | Thale cress | mitochondrion | 42.98 | 45.61 |
| AT3G53250.2 | Thale cress | endoplasmic reticulum, extracellular | 53.72 | 41.94 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 31.41 | 38.38 |
| Os04t0517900-01 | Rice | mitochondrion | 40.5 | 37.98 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 29.75 | 37.5 |
| OQU81983 | Sorghum | mitochondrion | 37.19 | 35.71 |
| Solyc01g110580.2.1 | Tomato | mitochondrion | 28.1 | 35.42 |
| Zm00001d003018_P001 | Maize | mitochondrion | 36.36 | 34.65 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 28.93 | 34.31 |
| Solyc04g081270.1.1 | Tomato | mitochondrion | 30.58 | 34.26 |
| Solyc06g065220.1.1 | Tomato | cytosol | 26.45 | 32.99 |
| Solyc01g110590.2.1 | Tomato | mitochondrion | 28.1 | 32.38 |
| Solyc01g110570.2.1 | Tomato | mitochondrion | 28.1 | 32.38 |
| Solyc01g110610.2.1 | Tomato | cytosol, mitochondrion, nucleus | 28.1 | 31.48 |
| Solyc10g054720.1.1 | Tomato | mitochondrion | 28.1 | 31.19 |
| Solyc01g110620.1.1 | Tomato | mitochondrion | 26.45 | 30.48 |
| TraesCS2B01G398600.1 | Wheat | cytosol, plastid | 34.71 | 27.81 |
| TraesCS2D01G377800.1 | Wheat | plastid | 35.54 | 27.74 |
| TraesCS2A01G381300.1 | Wheat | plastid | 34.71 | 27.27 |
| HORVU2Hr1G089400.1 | Barley | plastid | 34.71 | 26.75 |
| GSMUA_Achr1P09150_001 | Banana | nucleus | 40.5 | 25.65 |
Protein Annotations
| EnsemblPlants:Solyc09g007970.1.1 | EnsemblPlantsGene:Solyc09g007970.1 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF9 | PFAM:PF02519 | UniParc:UPI000276BB0A | UniProt:K4CQI6 | MapMan:35.2 |
Description
No Description!
Coordinates
chr9:-:1453519..1453884
Molecular Weight (calculated)
14129.4 Da
IEP (calculated)
9.331
GRAVY (calculated)
-0.275
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKFLKACQ NKWQKMGGKV IPSSACCDKW TMWPFEKEEK SIPRDVPKGH VVVYVGKYQK RFVIKITLLK HPLFKALLDQ AQEVYEFTAD SKLWIPCDEN
101: IFNSVIRCAT LPENRRISIC F
101: IFNSVIRCAT LPENRRISIC F
001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI
101: NESTFLDVVR CAGAPQHQNN CICI
Arabidopsis Description
Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.