Factsheet for PGSC0003DMT400055533

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g007970.1.1	Tomato	cytosol	98.35	98.35
PGSC0003DMT400080544	Potato	cytosol	72.73	72.13
VIT_08s0040g01670.t01	Wine grape	mitochondrion	66.94	65.32
AT2G37030.1	Thale cress	cytosol	58.68	57.26
KRH19939	Soybean	cytosol	56.2	55.28
KRH67711	Soybean	cytosol	47.93	54.72
KRH32539	Soybean	cytosol	56.2	54.4
Bra005223.1-P	Field mustard	cytosol	55.37	53.6
CDX91329	Canola	cytosol	55.37	53.6
CDX74993	Canola	cytosol	55.37	53.6
CDY46750	Canola	cytosol	54.55	53.23
Bra023093.1-P	Field mustard	cytosol	54.55	53.23
CDX79712	Canola	cytosol	54.55	53.23
Bra006984.1-P	Field mustard	cytosol	57.02	53.08
CDX78160	Canola	cytosol	57.02	53.08
KRG95997	Soybean	mitochondrion	54.55	52.8
CDY13307	Canola	cytosol	57.02	52.67
CDY18466	Canola	cytosol, mitochondrion	51.24	52.54
Bra017211.1-P	Field mustard	mitochondrion	51.24	52.54
CDX73568	Canola	cytosol	56.2	52.31
CDX67565	Canola	cytosol	56.2	51.91
Bra003125.1-P	Field mustard	cytosol	56.2	51.91
CDX70314	Canola	mitochondrion	43.8	49.53
Bra009535.1-P	Field mustard	mitochondrion	43.8	49.53
CDY10388	Canola	mitochondrion	42.98	48.6
CDY62892	Canola	mitochondrion	42.98	46.85
Bra028841.1-P	Field mustard	mitochondrion	42.98	46.85
CDY44355	Canola	mitochondrion	42.15	45.95
AT5G03310.1	Thale cress	mitochondrion	42.98	45.61
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	53.72	41.94
PGSC0003DMT400058186	Potato	cytosol	31.41	38.0
Os04t0517900-01	Rice	mitochondrion	40.5	37.98
PGSC0003DMT400075050	Potato	cytosol	29.75	37.5
OQU81983	Sorghum	mitochondrion	37.19	35.71
PGSC0003DMT400004186	Potato	mitochondrion	28.1	35.42
PGSC0003DMT400004089	Potato	cytosol	28.93	34.65
PGSC0003DMT400009439	Potato	mitochondrion	28.93	34.65
Zm00001d003018_P001	Maize	mitochondrion	36.36	34.65
PGSC0003DMT400009665	Potato	mitochondrion	29.75	33.33
PGSC0003DMT400004090	Potato	mitochondrion	28.93	33.33
PGSC0003DMT400004187	Potato	mitochondrion	28.1	32.38
PGSC0003DMT400087067	Potato	mitochondrion	28.93	31.82
PGSC0003DMT400004167	Potato	mitochondrion	28.1	31.48
PGSC0003DMT400067154	Potato	cytosol	27.27	31.43
PGSC0003DMT400068694	Potato	mitochondrion	28.1	31.19
PGSC0003DMT400004165	Potato	mitochondrion	26.45	30.19
TraesCS2B01G398600.1	Wheat	cytosol, plastid	34.71	27.81
TraesCS2D01G377800.1	Wheat	plastid	35.54	27.74
TraesCS2A01G381300.1	Wheat	plastid	34.71	27.27
HORVU2Hr1G089400.1	Barley	plastid	34.71	26.75
GSMUA_Achr1P09150_001	Banana	nucleus	40.5	25.65

Protein Annotations

EnsemblPlants:PGSC0003DMT400055533	EnsemblPlantsGene:PGSC0003DMG400021565	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	PGSC:PGSC0003DMG400021565	UniParc:UPI000296B8E2	UniProt:M1BY42
MapMan:35.2	:	:	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021565]

Coordinates

chr9:+:5480961..5481515

Molecular Weight (calculated)

14103.3 Da

IEP (calculated)

9.070

GRAVY (calculated)

-0.253

Length

121 amino acids

Sequence
(BLAST)

001: MDSKFLKACQ NKWEKMGGKV IPSSACCDKW TMWPFEKEEK SIPRDVPKGH VVVYVGKYQK RFVIKITLLK HPLFKALLDQ AQEVYEFTAD SKLWIPCDEN
101: IFNSVIRCAT LPESRRISIC F

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.