Factsheet for PGSC0003DMT400009665

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081270.1.1	Tomato	mitochondrion	93.52	93.52
VIT_18s0001g13980.t01	Wine grape	mitochondrion	76.85	79.81
PGSC0003DMT400068694	Potato	mitochondrion	77.78	77.06
KRH61056	Soybean	mitochondrion	71.3	77.0
KRH51719	Soybean	mitochondrion	71.3	77.0
PGSC0003DMT400004089	Potato	cytosol	71.3	76.24
PGSC0003DMT400004187	Potato	mitochondrion	72.22	74.29
Bra015832.1-P	Field mustard	mitochondrion	72.22	72.22
CDY47511	Canola	mitochondrion	72.22	72.22
GSMUA_Achr11P...	Banana	mitochondrion	68.52	71.84
Bra008207.1-P	Field mustard	cytosol, mitochondrion	62.96	71.58
GSMUA_Achr3P11290_001	Banana	mitochondrion	67.59	71.57
PGSC0003DMT400004090	Potato	mitochondrion	69.44	71.43
AT1G75580.1	Thale cress	mitochondrion	71.3	71.3
CDX73181	Canola	mitochondrion	71.3	71.3
PGSC0003DMT400058186	Potato	cytosol	65.74	71.0
PGSC0003DMT400004165	Potato	mitochondrion	69.44	70.75
GSMUA_Achr1P02500_001	Banana	mitochondrion	64.81	70.71
Bra003746.1-P	Field mustard	mitochondrion	70.37	70.37
PGSC0003DMT400004167	Potato	mitochondrion	70.37	70.37
CDX68122	Canola	mitochondrion	70.37	70.37
CDY13560	Canola	mitochondrion	69.44	69.44
CDY39041	Canola	mitochondrion	69.44	69.44
CDX85905	Canola	mitochondrion	69.44	69.44
GSMUA_Achr5P11350_001	Banana	mitochondrion	62.96	69.39
PGSC0003DMT400075050	Potato	cytosol	61.11	68.75
PGSC0003DMT400004186	Potato	mitochondrion	61.11	68.75
GSMUA_Achr7P06520_001	Banana	mitochondrion	63.89	66.99
GSMUA_Achr1P19860_001	Banana	mitochondrion	65.74	66.98
GSMUA_Achr1P06110_001	Banana	mitochondrion	59.26	64.65
PGSC0003DMT400009439	Potato	mitochondrion	60.19	64.36
PGSC0003DMT400087067	Potato	mitochondrion	64.81	63.64
CDY44482	Canola	mitochondrion	65.74	62.83
AT1G19830.1	Thale cress	mitochondrion	66.67	61.54
CDY55152	Canola	cytosol, mitochondrion	63.89	61.06
Os02t0445600-01	Rice	cytosol, mitochondrion	54.63	60.82
Bra025770.1-P	Field mustard	cytosol, mitochondrion	62.04	59.29
CDY29398	Canola	cytosol, mitochondrion	62.04	59.29
Os02t0445100-01	Rice	mitochondrion	49.07	55.21
Zm00001d051802_P001	Maize	mitochondrion	55.56	52.17
Os06t0137400-00	Rice	mitochondrion	57.41	52.1
KXG19242	Sorghum	mitochondrion	58.33	49.61
TraesCS4A01G375500.1	Wheat	mitochondrion	54.63	49.58
TraesCS7A01G077000.1	Wheat	mitochondrion	54.63	49.17
Zm00001d045423_P001	Maize	cytosol	56.48	48.8
TraesCS7D01G072600.1	Wheat	mitochondrion	54.63	47.2
Zm00001d004578_P001	Maize	plastid	47.22	41.13
Zm00001d012222_P001	Maize	cytosol	50.0	36.0
Zm00001d051962_P001	Maize	cytosol	50.93	34.38
PGSC0003DMT400067154	Potato	cytosol	32.41	33.33
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	52.78	31.67
PGSC0003DMT400055533	Potato	cytosol	33.33	29.75
PGSC0003DMT400080544	Potato	cytosol	32.41	28.69
Zm00001d008420_P001	Maize	cytosol	37.96	17.45
Zm00001d021237_P001	Maize	cytosol	37.96	14.44
Zm00001d033729_P001	Maize	nucleus	48.15	14.21
Zm00001d027753_P001	Maize	nucleus	39.81	10.17
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:PGSC0003DMT400009665	EnsemblPlantsGene:PGSC0003DMG400003773	EntrezGene:102591735	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF44	PFAM:PF02519	PGSC:PGSC0003DMG400003773	RefSeq:XP_006342031.1
UniParc:UPI000294EB2E	UniProt:M0ZWR0	MapMan:35.1	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003773]

Coordinates

chr4:-:70676588..70677247

Molecular Weight (calculated)

12354.0 Da

IEP (calculated)

9.212

GRAVY (calculated)

-0.413

Length

108 amino acids

Sequence
(BLAST)

001: MAIGKSNKLS QRAMLKQILK RCSSIGKKNG YQDEQQGGLP MDVPRGHFVV YVGKNRTRYI VPISILSRPE FRVLLQRAEE EFGFDHDMGL TIPCDEDFFE
101: SLTSSMLR

Best Arabidopsis Sequence Match ( AT2G16580.1 )
(BLAST)

001: MSILKKSTKL AQTAMLRQIL KRCSSLGKKN GGGGYEEVDL PLDVPKGHFP VYVGHNRSRY IVPISFLTNL DFQCLLRRAE EEFGFDHDMG LTIPCDELFF
101: QDLTSMIR

Arabidopsis Description

Putative auxin-induced protein [Source:UniProtKB/TrEMBL;Acc:Q9SI60]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.