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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:
  • mitochondrion 2
  • extracellular 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plastid
Any Predictor:extracellular, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:extracellular
TargetP:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G077000.1 Wheat mitochondrion 62.78 94.17
TraesCS4A01G375500.1 Wheat mitochondrion 61.67 93.28
TraesCS7D01G072600.1 Wheat mitochondrion 63.33 91.2
Zm00001d051802_P001 Maize mitochondrion 48.33 75.65
Os06t0137400-00 Rice mitochondrion 50.0 75.63
KXG19242 Sorghum mitochondrion 53.33 75.59
Zm00001d045423_P001 Maize cytosol 50.56 72.8
GSMUA_Achr1P02500_001 Banana mitochondrion 35.0 63.64
GSMUA_Achr5P11350_001 Banana mitochondrion 34.44 63.27
GSMUA_Achr11P... Banana mitochondrion 35.56 62.14
GSMUA_Achr3P11290_001 Banana mitochondrion 34.44 60.78
GSMUA_Achr1P19860_001 Banana mitochondrion 35.0 59.43
Bra008207.1-P Field mustard cytosol, mitochondrion 30.56 57.89
GSMUA_Achr7P06520_001 Banana mitochondrion 32.78 57.28
VIT_03s0038g00950.t01 Wine grape mitochondrion 32.78 56.73
VIT_18s0001g13980.t01 Wine grape mitochondrion 32.78 56.73
CDY13560 Canola mitochondrion 33.89 56.48
CDY39041 Canola mitochondrion 33.33 55.56
PGSC0003DMT400004089 Potato cytosol 31.11 55.45
PGSC0003DMT400004187 Potato mitochondrion 32.22 55.24
Solyc01g110570.2.1 Tomato mitochondrion 32.22 55.24
KRH24349 Soybean mitochondrion 32.22 55.24
AT1G75580.1 Thale cress mitochondrion 32.78 54.63
CDX85905 Canola mitochondrion 32.78 54.63
CDX73181 Canola mitochondrion 32.78 54.63
CDX68122 Canola mitochondrion 32.78 54.63
Bra003746.1-P Field mustard mitochondrion 32.78 54.63
CDY47511 Canola mitochondrion 32.78 54.63
GSMUA_Achr1P06110_001 Banana mitochondrion 30.0 54.55
KRH51719 Soybean mitochondrion 30.0 54.0
KRH61056 Soybean mitochondrion 30.0 54.0
KRH39815 Soybean mitochondrion 31.11 53.85
KRH60748 Soybean cytosol 31.67 53.77
KRH51448 Soybean cytosol 31.67 53.77
Bra015832.1-P Field mustard mitochondrion 32.22 53.7
PGSC0003DMT400004186 Potato mitochondrion 28.33 53.12
PGSC0003DMT400009665 Potato mitochondrion 31.67 52.78
Solyc04g081270.1.1 Tomato mitochondrion 31.67 52.78
PGSC0003DMT400068694 Potato mitochondrion 31.67 52.29
Solyc10g054720.1.1 Tomato mitochondrion 31.67 52.29
Solyc01g110580.2.1 Tomato mitochondrion 27.78 52.08
PGSC0003DMT400004167 Potato mitochondrion 31.11 51.85
Solyc01g110610.2.1 Tomato cytosol, mitochondrion, nucleus 31.11 51.85
Solyc01g110590.2.1 Tomato mitochondrion 29.44 50.48
PGSC0003DMT400004090 Potato mitochondrion 29.44 50.48
Zm00001d004578_P001 Maize plastid 34.44 50.0
Zm00001d012222_P001 Maize cytosol 41.11 49.33
Solyc01g110620.1.1 Tomato mitochondrion 28.33 48.57
PGSC0003DMT400004165 Potato mitochondrion 28.33 48.11
CDY44482 Canola mitochondrion 30.0 47.79
CDY55152 Canola cytosol, mitochondrion 30.0 47.79
AT1G19830.1 Thale cress mitochondrion 30.56 47.01
Bra025770.1-P Field mustard cytosol, mitochondrion 29.44 46.9
Zm00001d051962_P001 Maize cytosol 41.67 46.88
PGSC0003DMT400087067 Potato mitochondrion 28.33 46.36
CDY29398 Canola cytosol, mitochondrion 28.89 46.02
HORVU2Hr1G089400.1 Barley plastid 23.89 27.39
Zm00001d008420_P001 Maize cytosol 31.11 23.83
Zm00001d021237_P001 Maize cytosol 30.56 19.37
Zm00001d033729_P001 Maize nucleus 36.67 18.03
Zm00001d027753_P001 Maize nucleus 31.11 13.24
Zm00001d053311_P001 Maize nucleus 20.56 10.82
Protein Annotations
EnsemblPlants:HORVU7Hr1G017790.1EnsemblPlantsGene:HORVU7Hr1G017790GO:GO:0008150GO:GO:0009719GO:GO:0009733InterPro:SAUR_fam
PANTHER:PTHR31374PANTHER:PTHR31374:SF35PFAM:PF02519SEG:segUniParc:UPI000B47E4CBUniProt:A0A287VKC6
MapMan:35.1:::::
Description
No Description!
Coordinates
chrchr7H:-:23233801..23235177
Molecular Weight (calculated)
19649.7 Da
IEP (calculated)
8.878
GRAVY (calculated)
-0.214
Length
180 amino acids
Sequence
(BLAST)
001: RTNHGCSAIH PSSRLLYMLL PLPPHRPICL LLLHHLHTAG QAAHRVQPTS GTSSTQAQLG NAIMAIKKGG AAGLMQILKR CSSLGRRQQQ QQQSHGWEEE
101: EEAAPSDVPR GHFAVYVGES RRRFVVPIAV LDRPEFRSLL RRAEEEFGFG GAGDLLVLPC EELAFRSLCS ASSLPCAAAR
Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)
001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR
Arabidopsis Description
At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.