Factsheet for Solyc01g110570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004187	Potato	mitochondrion	99.05	99.05
VIT_03s0038g00950.t01	Wine grape	mitochondrion	88.57	89.42
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	88.57	86.11
GSMUA_Achr1P02500_001	Banana	mitochondrion	80.0	84.85
KRH60748	Soybean	cytosol	84.76	83.96
KRH51448	Soybean	cytosol	84.76	83.96
Solyc01g110590.2.1	Tomato	mitochondrion	83.81	83.81
KRH24349	Soybean	mitochondrion	82.86	82.86
GSMUA_Achr5P11350_001	Banana	mitochondrion	77.14	82.65
KRH39815	Soybean	mitochondrion	80.95	81.73
Solyc10g054720.1.1	Tomato	mitochondrion	83.81	80.73
Solyc01g110620.1.1	Tomato	mitochondrion	79.05	79.05
GSMUA_Achr11P...	Banana	mitochondrion	77.14	78.64
Solyc01g110580.2.1	Tomato	mitochondrion	71.43	78.12
Solyc04g081270.1.1	Tomato	mitochondrion	78.1	75.93
GSMUA_Achr3P11290_001	Banana	mitochondrion	71.43	73.53
Solyc03g033590.1.1	Tomato	mitochondrion	67.62	71.72
GSMUA_Achr7P06520_001	Banana	mitochondrion	69.52	70.87
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	64.76	70.83
GSMUA_Achr1P06110_001	Banana	mitochondrion	62.86	66.67
GSMUA_Achr1P19860_001	Banana	mitochondrion	66.67	66.04
Solyc02g084010.1.1	Tomato	mitochondrion	62.86	64.71
Os02t0445600-01	Rice	cytosol, mitochondrion	57.14	61.86
Os02t0445100-01	Rice	mitochondrion	51.43	56.25
Zm00001d051802_P001	Maize	mitochondrion	58.1	53.04
Os06t0137400-00	Rice	mitochondrion	60.0	52.94
KXG19242	Sorghum	mitochondrion	60.95	50.39
Zm00001d045423_P001	Maize	cytosol	59.05	49.6
TraesCS4A01G375500.1	Wheat	mitochondrion	56.19	49.58
TraesCS7A01G077000.1	Wheat	mitochondrion	56.19	49.17
TraesCS7D01G072600.1	Wheat	mitochondrion	56.19	47.2
Zm00001d004578_P001	Maize	plastid	47.62	40.32
Solyc06g065220.1.1	Tomato	cytosol	33.33	36.08
Zm00001d012222_P001	Maize	cytosol	50.48	35.33
Zm00001d051962_P001	Maize	cytosol	52.38	34.38
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	55.24	32.22
Solyc09g007970.1.1	Tomato	cytosol	32.38	28.1
Solyc10g086200.1.1	Tomato	cytosol	31.43	26.83
Zm00001d008420_P001	Maize	cytosol	40.0	17.87
Zm00001d021237_P001	Maize	cytosol	39.05	14.44
Zm00001d033729_P001	Maize	nucleus	46.67	13.39
Zm00001d027753_P001	Maize	nucleus	39.05	9.69
Zm00001d053311_P001	Maize	nucleus	22.86	7.02

Protein Annotations

EnsemblPlants:Solyc01g110570.2.1	EnsemblPlantsGene:Solyc01g110570.2	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	UniParc:UPI0002768FB6	UniProt:K4B3S0	MapMan:35.1

Description

No Description!

Coordinates

chr1:-:97225774..97226418

Molecular Weight (calculated)

12099.7 Da

IEP (calculated)

8.082

GRAVY (calculated)

-0.337

Length

105 amino acids

Sequence
(BLAST)

001: MAIRKSNKMP QAAILKQILK RCSSLGKKNS YNDEDHLPID VPKGHFAVYV GENRSRYIVP ISFLTHPEFQ CLLRQSEEEF GFDHDMGITI PCEEVVFRSL
101: TSMLR

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.