Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004167 | Potato | mitochondrion | 96.3 | 96.3 |
| Solyc01g110570.2.1 | Tomato | mitochondrion | 86.11 | 88.57 |
| VIT_03s0038g00950.t01 | Wine grape | mitochondrion | 80.56 | 83.65 |
| GSMUA_Achr1P02500_001 | Banana | mitochondrion | 74.07 | 80.81 |
| KRH51448 | Soybean | cytosol | 78.7 | 80.19 |
| KRH60748 | Soybean | cytosol | 78.7 | 80.19 |
| Solyc01g110590.2.1 | Tomato | mitochondrion | 76.85 | 79.05 |
| Solyc10g054720.1.1 | Tomato | mitochondrion | 79.63 | 78.9 |
| GSMUA_Achr5P11350_001 | Banana | mitochondrion | 71.3 | 78.57 |
| KRH24349 | Soybean | mitochondrion | 75.93 | 78.1 |
| Solyc01g110620.1.1 | Tomato | mitochondrion | 75.0 | 77.14 |
| KRH39815 | Soybean | mitochondrion | 74.07 | 76.92 |
| GSMUA_Achr11P... | Banana | mitochondrion | 72.22 | 75.73 |
| Solyc01g110580.2.1 | Tomato | mitochondrion | 65.74 | 73.96 |
| Solyc04g081270.1.1 | Tomato | mitochondrion | 72.22 | 72.22 |
| GSMUA_Achr3P11290_001 | Banana | mitochondrion | 66.67 | 70.59 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 62.04 | 67.68 |
| GSMUA_Achr7P06520_001 | Banana | mitochondrion | 63.89 | 66.99 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 58.33 | 65.62 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 60.19 | 63.73 |
| GSMUA_Achr1P06110_001 | Banana | mitochondrion | 58.33 | 63.64 |
| GSMUA_Achr1P19860_001 | Banana | mitochondrion | 62.04 | 63.21 |
| Os02t0445600-01 | Rice | cytosol, mitochondrion | 54.63 | 60.82 |
| Os02t0445100-01 | Rice | mitochondrion | 49.07 | 55.21 |
| Zm00001d051802_P001 | Maize | mitochondrion | 54.63 | 51.3 |
| Os06t0137400-00 | Rice | mitochondrion | 55.56 | 50.42 |
| KXG19242 | Sorghum | mitochondrion | 58.33 | 49.61 |
| Zm00001d045423_P001 | Maize | cytosol | 55.56 | 48.0 |
| TraesCS4A01G375500.1 | Wheat | mitochondrion | 52.78 | 47.9 |
| TraesCS7A01G077000.1 | Wheat | mitochondrion | 52.78 | 47.5 |
| TraesCS7D01G072600.1 | Wheat | mitochondrion | 52.78 | 45.6 |
| Zm00001d004578_P001 | Maize | plastid | 45.37 | 39.52 |
| Solyc06g065220.1.1 | Tomato | cytosol | 32.41 | 36.08 |
| Zm00001d012222_P001 | Maize | cytosol | 48.15 | 34.67 |
| Zm00001d051962_P001 | Maize | cytosol | 49.07 | 33.12 |
| HORVU7Hr1G017790.1 | Barley | extracellular, mitochondrion, plastid | 51.85 | 31.11 |
| Solyc09g007970.1.1 | Tomato | cytosol | 31.48 | 28.1 |
| Solyc10g086200.1.1 | Tomato | cytosol | 30.56 | 26.83 |
| Zm00001d008420_P001 | Maize | cytosol | 37.96 | 17.45 |
| Zm00001d021237_P001 | Maize | cytosol | 37.04 | 14.08 |
| Zm00001d033729_P001 | Maize | nucleus | 43.52 | 12.84 |
| Zm00001d027753_P001 | Maize | nucleus | 37.04 | 9.46 |
| Zm00001d053311_P001 | Maize | nucleus | 21.3 | 6.73 |
Protein Annotations
| EnsemblPlants:Solyc01g110610.2.1 | EnsemblPlantsGene:Solyc01g110610.2 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | PFAM:PF02519 | UniParc:UPI0002768FBA | UniProt:K4B3S4 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:+:97260467..97260907
Molecular Weight (calculated)
12550.1 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.319
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIRKSNKQS HSAILKQIII RCSSLGMKQG YDDEDYQFPI DVPKGHFAVY VGENRSRYIV PISFLTHPEF QCLLRQSEEE FGFDHDMGIT IPCEEVVFRS
101: LTNSMLRY
101: LTNSMLRY
001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR
101: RSLTSMLR
Arabidopsis Description
At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.