Factsheet for Zm00001d027753_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021237_P001	Maize	cytosol	58.63	87.32
Zm00001d008420_P001	Maize	cytosol	47.99	86.38
Zm00001d053311_P001	Maize	nucleus	52.01	64.33
Zm00001d033729_P001	Maize	nucleus	51.06	59.02
Zm00001d051802_P001	Maize	mitochondrion	15.37	56.52
Zm00001d045423_P001	Maize	cytosol	16.08	54.4
Zm00001d004578_P001	Maize	plastid	15.84	54.03
Os06t0137400-00	Rice	mitochondrion	14.66	52.1
KXG19242	Sorghum	mitochondrion	15.37	51.18
TraesCS4A01G375500.1	Wheat	mitochondrion	13.24	47.06
TraesCS7A01G077000.1	Wheat	mitochondrion	13.24	46.67
Bra008207.1-P	Field mustard	cytosol, mitochondrion	10.17	45.26
GSMUA_Achr7P06520_001	Banana	mitochondrion	10.87	44.66
TraesCS7D01G072600.1	Wheat	mitochondrion	13.0	44.0
GSMUA_Achr11P...	Banana	mitochondrion	10.64	43.69
GSMUA_Achr1P19860_001	Banana	mitochondrion	10.87	43.4
Zm00001d012222_P001	Maize	cytosol	15.37	43.33
GSMUA_Achr3P11290_001	Banana	mitochondrion	10.4	43.14
GSMUA_Achr5P11350_001	Banana	mitochondrion	9.93	42.86
GSMUA_Achr1P02500_001	Banana	mitochondrion	9.93	42.42
VIT_18s0001g13980.t01	Wine grape	mitochondrion	10.4	42.31
VIT_03s0038g00950.t01	Wine grape	mitochondrion	10.4	42.31
Zm00001d051962_P001	Maize	cytosol	15.84	41.88
CDX68122	Canola	mitochondrion	10.64	41.67
Bra003746.1-P	Field mustard	mitochondrion	10.64	41.67
CDX85905	Canola	mitochondrion	10.64	41.67
CDY13560	Canola	mitochondrion	10.4	40.74
PGSC0003DMT400004089	Potato	cytosol	9.69	40.59
GSMUA_Achr1P06110_001	Banana	mitochondrion	9.46	40.4
KRH61056	Soybean	mitochondrion	9.46	40.0
KRH51719	Soybean	mitochondrion	9.46	40.0
AT1G75580.1	Thale cress	mitochondrion	10.17	39.81
CDY39041	Canola	mitochondrion	10.17	39.81
PGSC0003DMT400009665	Potato	mitochondrion	10.17	39.81
KRH60748	Soybean	cytosol	9.93	39.62
KRH51448	Soybean	cytosol	9.93	39.62
PGSC0003DMT400004186	Potato	mitochondrion	8.98	39.58
Solyc01g110580.2.1	Tomato	mitochondrion	8.98	39.58
KRH24349	Soybean	mitochondrion	9.69	39.05
PGSC0003DMT400004090	Potato	mitochondrion	9.69	39.05
PGSC0003DMT400004187	Potato	mitochondrion	9.69	39.05
Solyc01g110590.2.1	Tomato	mitochondrion	9.69	39.05
Solyc01g110570.2.1	Tomato	mitochondrion	9.69	39.05
Solyc04g081270.1.1	Tomato	mitochondrion	9.93	38.89
Bra015832.1-P	Field mustard	mitochondrion	9.93	38.89
CDX73181	Canola	mitochondrion	9.93	38.89
CDY47511	Canola	mitochondrion	9.93	38.89
Solyc10g054720.1.1	Tomato	mitochondrion	9.93	38.53
PGSC0003DMT400004167	Potato	mitochondrion	9.69	37.96
PGSC0003DMT400068694	Potato	mitochondrion	9.69	37.61
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	9.46	37.04
KRH39815	Soybean	mitochondrion	8.98	36.54
Solyc01g110620.1.1	Tomato	mitochondrion	8.98	36.19
PGSC0003DMT400004165	Potato	mitochondrion	8.98	35.85
AT1G19830.1	Thale cress	mitochondrion	9.69	35.04
CDY44482	Canola	mitochondrion	9.22	34.51
CDY55152	Canola	cytosol, mitochondrion	9.22	34.51
CDY29398	Canola	cytosol, mitochondrion	9.22	34.51
Bra025770.1-P	Field mustard	cytosol, mitochondrion	9.22	34.51
PGSC0003DMT400087067	Potato	mitochondrion	8.51	32.73
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	13.24	31.11
Zm00001d003018_P001	Maize	mitochondrion	8.98	29.92

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A1D6JPC4	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	ProteinID:ONL93858.1	PFAM:PF00010	PFAM:PF02519	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF194	InterPro:SAUR_fam	SUPFAM:SSF47459	UniParc:UPI000220EA87	EnsemblPlantsGene:Zm00001d027753	EnsemblPlants:Zm00001d027753_P001
EnsemblPlants:Zm00001d027753_T001	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

bHLH-transcription factor 110SAUR-like auxin-responsive protein family

Coordinates

chr1:+:12658925..12661298

Molecular Weight (calculated)

46813.1 Da

IEP (calculated)

8.010

GRAVY (calculated)

-0.635

Length

423 amino acids

Sequence
(BLAST)

001: MACRGRWVAG PIFATTGRGE EEATGLPSDV PRDHFAVYVG ERRRRFVVPI TLLDRPEFRY LLRRAKEEFT SVGGALILPC EEVAFHSLTS ALACARRGDV
101: LHRVIGILTR WTAIRGPQRR VRRSPSCKDS VSPFTPTHKI SLLSCPLVDC ACSLQWRPHR SPDDDLVELL WHNGSVVAQP QAHHRPAPPS DRDPLGTNDI
201: TAEETAAWFP DTLDDPLEKD LYTQLWYSTI ADAAPQHEGT FPGPTSHPSP PLPPVGSSNV ESSWAGDICS TFCGSNQVPR TPTGIRGKDA ALQSEVPSGV
301: GAHDGTSSSG GSGSNYGGSG LPSDSVHGHK RKGMCRDESD SRSEKIESKY RCLSGIELMR KLQDVECEES TEETKPWQRN GPKRRTRAAE VHNLSERRRR
401: DRIKEKMRVL QELIPHCNKV QVP

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.