CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025770.1-P	Field mustard	cytosol, mitochondrion	98.23	98.23
CDY29398	Canola	cytosol, mitochondrion	98.23	98.23
AT1G19830.1	Thale cress	mitochondrion	84.96	82.05
CDY44482	Canola	mitochondrion	79.65	79.65
CDX68122	Canola	mitochondrion	73.45	76.85
CDY47511	Canola	mitochondrion	72.57	75.93
CDX85905	Canola	mitochondrion	72.57	75.93
CDX73181	Canola	mitochondrion	72.57	75.93
CDY13560	Canola	mitochondrion	71.68	75.0
CDY39041	Canola	mitochondrion	70.8	74.07
VIT_18s0001g13980.t01	Wine grape	mitochondrion	67.26	73.08
KRH61056	Soybean	mitochondrion	63.72	72.0
KRH51719	Soybean	mitochondrion	63.72	72.0
GSMUA_Achr1P02500_001	Banana	mitochondrion	61.06	69.7
CDY63257	Canola	mitochondrion	65.49	69.16
CDX76303	Canola	mitochondrion	65.49	69.16
CDY70461	Canola	mitochondrion	65.49	69.16
GSMUA_Achr5P11350_001	Banana	mitochondrion	59.29	68.37
CDX82007	Canola	mitochondrion	62.83	68.27
CDY22408	Canola	mitochondrion	62.83	68.27
CDY13831	Canola	mitochondrion	62.83	68.27
CDX72733	Canola	mitochondrion	62.83	68.27
CDY41947	Canola	mitochondrion	62.83	67.62
Solyc04g081270.1.1	Tomato	mitochondrion	64.6	67.59
CDX75460	Canola	mitochondrion	63.72	67.29
CDY42589	Canola	mitochondrion	61.95	66.67
CDX69086	Canola	mitochondrion	62.83	66.36
GSMUA_Achr11P...	Banana	mitochondrion	60.18	66.02
CDX72500	Canola	mitochondrion	61.06	64.49
PGSC0003DMT400009665	Potato	mitochondrion	61.06	63.89
CDY45331	Canola	mitochondrion	60.18	63.55
GSMUA_Achr3P11290_001	Banana	mitochondrion	55.75	61.76
CDY08909	Canola	mitochondrion	56.64	61.54
CDY24829	Canola	mitochondrion	56.64	61.54
CDY02251	Canola	mitochondrion	58.41	61.11
CDX89731	Canola	mitochondrion	58.41	61.11
CDY47053	Canola	mitochondrion, plastid	53.1	60.61
GSMUA_Achr1P19860_001	Banana	mitochondrion	55.75	59.43
CDX72576	Canola	mitochondrion	51.33	58.59
CDY68553	Canola	cytosol, mitochondrion, nucleus	55.75	58.33
CDY30334	Canola	cytosol, mitochondrion, nucleus	55.75	58.33
CDY38169	Canola	cytosol, mitochondrion, nucleus	55.75	58.33
CDY54551	Canola	cytosol, mitochondrion, nucleus	55.75	58.33
CDX75553	Canola	mitochondrion, plastid	53.1	57.69
CDX69199	Canola	mitochondrion, plastid	53.1	57.69
GSMUA_Achr1P06110_001	Banana	mitochondrion	50.44	57.58
GSMUA_Achr7P06520_001	Banana	mitochondrion	51.33	56.31
CDY18596	Canola	cytosol, mitochondrion, nucleus	47.79	54.0
CDX81404	Canola	cytosol, mitochondrion, nucleus	46.9	53.0
Os02t0445600-01	Rice	cytosol, mitochondrion	45.13	52.58
Os02t0445100-01	Rice	mitochondrion	42.48	50.0
Zm00001d051802_P001	Maize	mitochondrion	49.56	48.7
Os06t0137400-00	Rice	mitochondrion	49.56	47.06
Zm00001d045423_P001	Maize	cytosol	51.33	46.4
KXG19242	Sorghum	mitochondrion	51.33	45.67
TraesCS4A01G375500.1	Wheat	mitochondrion	47.79	45.38
TraesCS7A01G077000.1	Wheat	mitochondrion	47.79	45.0
TraesCS7D01G072600.1	Wheat	mitochondrion	47.79	43.2
CDX73741	Canola	cytosol, mitochondrion, nucleus	38.05	41.75
Zm00001d004578_P001	Maize	plastid	39.82	36.29
CDY20904	Canola	cytosol, extracellular	38.94	34.65
CDY18466	Canola	cytosol, mitochondrion	34.51	33.05
CDY46750	Canola	cytosol	34.51	31.45
CDX79712	Canola	cytosol	34.51	31.45
Zm00001d012222_P001	Maize	cytosol	41.59	31.33
Zm00001d051962_P001	Maize	cytosol	43.36	30.62
CDY05061	Canola	cytosol	26.55	30.61
CDX90724	Canola	cytosol	26.55	30.61
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	47.79	30.0
CDX91329	Canola	cytosol	32.74	29.6
CDX74993	Canola	cytosol	32.74	29.6
CDX70314	Canola	mitochondrion	27.43	28.97
CDY10388	Canola	mitochondrion	26.55	28.04
CDY44355	Canola	mitochondrion	27.43	27.93
CDY62892	Canola	mitochondrion	26.55	27.03
CDX73568	Canola	cytosol	29.2	25.38
CDX78160	Canola	cytosol	29.2	25.38
CDY13307	Canola	cytosol	29.2	25.19
CDX67565	Canola	cytosol	29.2	25.19
Zm00001d008420_P001	Maize	cytosol	37.17	17.87
Zm00001d021237_P001	Maize	cytosol	35.4	14.08
Zm00001d033729_P001	Maize	nucleus	40.71	12.57
Zm00001d027753_P001	Maize	nucleus	34.51	9.22
Zm00001d053311_P001	Maize	nucleus	22.12	7.31

Protein Annotations

EnsemblPlants:CDY55152	EnsemblPlantsGene:GSBRNA2T00016449001	GO:A0A078IXX4	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY55152	ProteinID:CDY55152.1
SEG:seg	UniParc:UPI0004EB0FDF	UniProt:A0A078IXX4	MapMan:35.1	:	:

Description

BnaC05g50280DBnaC05g50280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXX4]

Coordinates

chrLK033378:-:57750..58091

Molecular Weight (calculated)

12847.8 Da

IEP (calculated)

7.578

GRAVY (calculated)

-0.068

Length

113 amino acids

Sequence
(BLAST)

001: MAIKTLTATM LTQTTMIKQI LKRCSSLGKK QSSEFNDKHD GQSLPLDVPK GHFVVYVGEN RVRYVLHISF LTRPEFKLLL QQAEEEFGFD HDMGLTIPCE
101: EVAFKSIVTS MLI

Best Arabidopsis Sequence Match ( AT1G19830.1 )
(BLAST)

001: MAIINRSKLT QTTMIKQILK RCSSLGKKQS SEYNDTHEHD GDSLPLDVPK GHFVVYVGGN RVRYVLPISF LTRPEFQLLL QQAEEEFGFD HNMGLTIPCE
101: EVAFKSLITS MLQPTYI

Arabidopsis Description

At1g19830 [Source:UniProtKB/TrEMBL;Acc:Q9FXI0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.