CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017676.1-P	Field mustard	mitochondrion	100.0	100.0
CDX72500	Canola	mitochondrion	93.46	93.46
AT4G34760.1	Thale cress	mitochondrion	92.52	92.52
CDX76303	Canola	mitochondrion	91.59	91.59
CDY63257	Canola	mitochondrion	91.59	91.59
CDY70461	Canola	mitochondrion	91.59	91.59
CDX75460	Canola	mitochondrion	90.65	90.65
CDX69086	Canola	mitochondrion	89.72	89.72
CDX89731	Canola	mitochondrion	82.24	81.48
CDY02251	Canola	mitochondrion	79.44	78.7
CDX72733	Canola	mitochondrion	73.83	75.96
CDY22408	Canola	mitochondrion	73.83	75.96
CDY13831	Canola	mitochondrion	73.83	75.96
CDX82007	Canola	mitochondrion	73.83	75.96
CDY41947	Canola	mitochondrion	73.83	75.24
CDY42589	Canola	mitochondrion	72.9	74.29
VIT_04s0023g03230.t01	Wine grape	mitochondrion	71.96	74.04
PGSC0003DMT400075050	Potato	cytosol	66.36	73.96
Solyc03g033590.1.1	Tomato	mitochondrion	68.22	73.74
PGSC0003DMT400058186	Potato	cytosol	68.22	73.0
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	65.42	72.92
CDY47511	Canola	mitochondrion	72.9	72.22
CDY39041	Canola	mitochondrion	72.9	72.22
CDY13560	Canola	mitochondrion	72.9	72.22
CDY47053	Canola	mitochondrion, plastid	66.36	71.72
KRH08093	Soybean	cytosol	71.03	71.7
CDX73181	Canola	mitochondrion	71.96	71.3
KRH69796	Soybean	cytosol	71.03	71.03
CDX68122	Canola	mitochondrion	71.03	70.37
KRH28787	Soybean	cytosol, mitochondrion	68.22	70.19
CDX72576	Canola	mitochondrion	64.49	69.7
CDX85905	Canola	mitochondrion	70.09	69.44
CDY08909	Canola	mitochondrion	66.36	68.27
CDY24829	Canola	mitochondrion	66.36	68.27
PGSC0003DMT400009439	Potato	mitochondrion	63.55	67.33
Solyc02g084010.1.1	Tomato	mitochondrion	63.55	66.67
CDX69199	Canola	mitochondrion, plastid	64.49	66.35
CDX75553	Canola	mitochondrion, plastid	64.49	66.35
CDY68553	Canola	cytosol, mitochondrion, nucleus	65.42	64.81
CDY38169	Canola	cytosol, mitochondrion, nucleus	64.49	63.89
CDY30334	Canola	cytosol, mitochondrion, nucleus	64.49	63.89
CDY54551	Canola	cytosol, mitochondrion, nucleus	64.49	63.89
CDY44482	Canola	mitochondrion	65.42	61.95
CDY55152	Canola	cytosol, mitochondrion	63.55	60.18
CDX81404	Canola	cytosol, mitochondrion, nucleus	55.14	59.0
CDY29398	Canola	cytosol, mitochondrion	61.68	58.41
CDY18596	Canola	cytosol, mitochondrion, nucleus	54.21	58.0
CDX73741	Canola	cytosol, mitochondrion, nucleus	49.53	51.46
KRH76667	Soybean	cytosol, plastid	67.29	47.68
CDY20904	Canola	cytosol, extracellular	47.66	40.16
CDX90724	Canola	cytosol	30.84	33.67
CDY05061	Canola	cytosol	30.84	33.67
CDX70314	Canola	mitochondrion	28.04	28.04
CDY10388	Canola	mitochondrion	28.04	28.04
CDX74993	Canola	cytosol	32.71	28.0
CDY18466	Canola	cytosol, mitochondrion	29.91	27.12
CDX79712	Canola	cytosol	30.84	26.61
CDY46750	Canola	cytosol	30.84	26.61
CDX91329	Canola	cytosol	30.84	26.4
CDY62892	Canola	mitochondrion	27.1	26.13
CDY44355	Canola	mitochondrion	27.1	26.13
CDY13307	Canola	cytosol	28.97	23.66
CDX67565	Canola	cytosol	28.97	23.66
CDX73568	Canola	cytosol	28.04	23.08
CDX78160	Canola	cytosol	28.04	23.08

Protein Annotations

EnsemblPlants:CDY45331	EnsemblPlantsGene:GSBRNA2T00081797001	GO:A0A078I5Y8	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY45331	ProteinID:CDY45331.1
UniParc:UPI000254128A	UniProt:A0A078I5Y8	MapMan:35.1	:	:	:

Description

BnaA03g53040DBnaA03g53040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5Y8]

Coordinates

chrLK032620:-:202396..203055

Molecular Weight (calculated)

12137.7 Da

IEP (calculated)

7.509

GRAVY (calculated)

-0.237

Length

107 amino acids

Sequence
(BLAST)

001: MAIMKKSSKL TQTAMLKQIL KRCSSLGKTN GGGYDEDFLP LDVPKGHFPV YVGENRSRYI VPVSFLTHPE FQSLLRRAEE EFGFDHDMGI TIPCDELVFQ
101: NLTSVIR

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.