CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63257	Canola	mitochondrion	100.0	100.0
CDX76303	Canola	mitochondrion	100.0	100.0
Bra034651.1-P	Field mustard	mitochondrion	96.26	99.04
AT4G34760.1	Thale cress	mitochondrion	91.59	91.59
CDY45331	Canola	mitochondrion	91.59	91.59
CDX75460	Canola	mitochondrion	91.59	91.59
CDX72500	Canola	mitochondrion	90.65	90.65
CDX69086	Canola	mitochondrion	89.72	89.72
CDX89731	Canola	mitochondrion	81.31	80.56
CDY02251	Canola	mitochondrion	80.37	79.63
VIT_04s0023g03230.t01	Wine grape	mitochondrion	76.64	78.85
CDY22408	Canola	mitochondrion	76.64	78.85
CDX72733	Canola	mitochondrion	76.64	78.85
CDY41947	Canola	mitochondrion	76.64	78.1
CDY13831	Canola	mitochondrion	75.7	77.88
CDX82007	Canola	mitochondrion	75.7	77.88
CDY42589	Canola	mitochondrion	75.7	77.14
CDY47053	Canola	mitochondrion, plastid	70.09	75.76
CDY47511	Canola	mitochondrion	75.7	75.0
Solyc03g033590.1.1	Tomato	mitochondrion	69.16	74.75
CDY13560	Canola	mitochondrion	74.77	74.07
CDY39041	Canola	mitochondrion	74.77	74.07
CDX68122	Canola	mitochondrion	74.77	74.07
CDX73181	Canola	mitochondrion	74.77	74.07
KRH28787	Soybean	cytosol, mitochondrion	71.96	74.04
CDX72576	Canola	mitochondrion	68.22	73.74
KRH08093	Soybean	cytosol	72.9	73.58
CDX85905	Canola	mitochondrion	73.83	73.15
CDY08909	Canola	mitochondrion	71.03	73.08
CDY24829	Canola	mitochondrion	71.03	73.08
PGSC0003DMT400058186	Potato	cytosol	68.22	73.0
KRH69796	Soybean	cytosol	72.9	72.9
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	64.49	71.88
PGSC0003DMT400075050	Potato	cytosol	64.49	71.88
CDX75553	Canola	mitochondrion, plastid	68.22	70.19
CDX69199	Canola	mitochondrion, plastid	68.22	70.19
CDY68553	Canola	cytosol, mitochondrion, nucleus	69.16	68.52
CDY38169	Canola	cytosol, mitochondrion, nucleus	68.22	67.59
CDY44482	Canola	mitochondrion	71.03	67.26
CDY54551	Canola	cytosol, mitochondrion, nucleus	67.29	66.67
CDY30334	Canola	cytosol, mitochondrion, nucleus	67.29	66.67
PGSC0003DMT400009439	Potato	mitochondrion	62.62	66.34
Solyc02g084010.1.1	Tomato	mitochondrion	62.62	65.69
CDY55152	Canola	cytosol, mitochondrion	69.16	65.49
CDY29398	Canola	cytosol, mitochondrion	67.29	63.72
CDX81404	Canola	cytosol, mitochondrion, nucleus	57.94	62.0
CDY18596	Canola	cytosol, mitochondrion, nucleus	57.01	61.0
CDX73741	Canola	cytosol, mitochondrion, nucleus	48.6	50.49
KRH76667	Soybean	cytosol, plastid	70.09	49.67
CDY20904	Canola	cytosol, extracellular	47.66	40.16
CDY05061	Canola	cytosol	29.91	32.65
CDX90724	Canola	cytosol	29.91	32.65
CDX74993	Canola	cytosol	32.71	28.0
CDY18466	Canola	cytosol, mitochondrion	30.84	27.97
CDY46750	Canola	cytosol	31.78	27.42
CDX79712	Canola	cytosol	31.78	27.42
CDX70314	Canola	mitochondrion	27.1	27.1
CDY10388	Canola	mitochondrion	27.1	27.1
CDX91329	Canola	cytosol	30.84	26.4
CDY62892	Canola	mitochondrion	26.17	25.23
CDY44355	Canola	mitochondrion	26.17	25.23
CDY13307	Canola	cytosol	30.84	25.19
CDX67565	Canola	cytosol	30.84	25.19
CDX78160	Canola	cytosol	29.91	24.62
CDX73568	Canola	cytosol	29.91	24.62

Protein Annotations

EnsemblPlants:CDY70461	EnsemblPlantsGene:GSBRNA2T00003663001	GO:A0A078JB78	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY63257.1	ProteinID:CDY70461
ProteinID:CDY70461.1	SEG:seg	UniParc:UPI000182B509	UniProt:A0A078JB78	MapMan:35.1	:

Description

BnaCnng68470DBnaA03g58660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB78]

Coordinates

chrLK042187:-:1785..2220

Molecular Weight (calculated)

12244.0 Da

IEP (calculated)

8.221

GRAVY (calculated)

-0.228

Length

107 amino acids

Sequence
(BLAST)

001: MAIMKKSLKL TQTAMLKQIL KRCSSLGKKN GGGYDDDYLP LDVPKGHFPV YVGENRSRYI VPVSFLTHPE FQFLLRRAEE EFGFDHDMGL TIPCDEVVFQ
101: SLTSMIR

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.