CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95612
KRH32094
KRH55381
KRH67287

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36110.1	KRG95612	AT4G02590.1	21798944
AT4G36110.1	KRH32094	AT4G02590.1	21798944
AT4G36110.1	KRH55381	AT4G02590.1	21798944
AT4G36110.1	KRH67287	AT4G02590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69796	Soybean	cytosol	100.0	99.07
KRH28787	Soybean	cytosol, mitochondrion	88.68	90.38
VIT_04s0023g03230.t01	Wine grape	mitochondrion	79.25	80.77
KRH39815	Soybean	mitochondrion	75.47	76.92
KRH24349	Soybean	mitochondrion	74.53	75.24
AT4G34760.1	Thale cress	mitochondrion	75.47	74.77
Bra011560.1-P	Field mustard	mitochondrion	75.47	74.77
CDX75460	Canola	mitochondrion	75.47	74.77
Solyc03g033590.1.1	Tomato	mitochondrion	69.81	74.75
AT4G38860.1	Thale cress	mitochondrion	73.58	74.29
CDY22408	Canola	mitochondrion	72.64	74.04
CDX72733	Canola	mitochondrion	72.64	74.04
Bra033581.1-P	Field mustard	mitochondrion	72.64	74.04
PGSC0003DMT400058186	Potato	cytosol	69.81	74.0
Bra034651.1-P	Field mustard	mitochondrion	71.7	73.08
CDY70461	Canola	mitochondrion	73.58	72.9
CDX69086	Canola	mitochondrion	73.58	72.9
CDX76303	Canola	mitochondrion	73.58	72.9
CDY63257	Canola	mitochondrion	73.58	72.9
KRH60748	Soybean	cytosol	72.64	72.64
KRH51448	Soybean	cytosol	72.64	72.64
CDY41947	Canola	mitochondrion	71.7	72.38
Bra011889.1-P	Field mustard	mitochondrion	71.7	72.38
AT2G21220.1	Thale cress	mitochondrion	70.75	72.12
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	65.09	71.88
Bra031171.1-P	Field mustard	mitochondrion	69.81	71.15
CDX82007	Canola	mitochondrion	69.81	71.15
CDY13831	Canola	mitochondrion	69.81	71.15
CDY45331	Canola	mitochondrion	71.7	71.03
Bra017676.1-P	Field mustard	mitochondrion	71.7	71.03
PGSC0003DMT400075050	Potato	cytosol	64.15	70.83
Bra017747.1-P	Field mustard	mitochondrion, plastid	66.04	70.71
CDY47053	Canola	mitochondrion, plastid	66.04	70.71
CDY42589	Canola	mitochondrion	69.81	70.48
CDX72500	Canola	mitochondrion	70.75	70.09
KRH51719	Soybean	mitochondrion	66.04	70.0
KRH61056	Soybean	mitochondrion	66.04	70.0
AT4G36110.1	Thale cress	mitochondrion	67.92	69.23
CDX72576	Canola	mitochondrion	64.15	68.69
CDY24829	Canola	mitochondrion	66.98	68.27
Bra010501.1-P	Field mustard	mitochondrion	66.98	68.27
CDY08909	Canola	mitochondrion	66.98	68.27
AT2G16580.1	Thale cress	mitochondrion	68.87	67.59
AT2G18010.1	Thale cress	cytosol, plastid	70.75	66.96
CDX89731	Canola	mitochondrion	67.92	66.67
CDX75553	Canola	mitochondrion, plastid	65.09	66.35
Bra011662.1-P	Field mustard	mitochondrion, plastid	65.09	66.35
CDX69199	Canola	mitochondrion, plastid	65.09	66.35
PGSC0003DMT400009439	Potato	mitochondrion	63.21	66.34
CDY02251	Canola	mitochondrion	66.98	65.74
Bra013061.1-P	Field mustard	mitochondrion	66.98	65.74
Solyc02g084010.1.1	Tomato	mitochondrion	63.21	65.69
CDY68553	Canola	cytosol, mitochondrion, nucleus	65.09	63.89
CDY38169	Canola	cytosol, mitochondrion, nucleus	64.15	62.96
Bra039909.1-P	Field mustard	mitochondrion	64.15	62.96
CDY54551	Canola	cytosol, mitochondrion, nucleus	63.21	62.04
CDY30334	Canola	cytosol, mitochondrion, nucleus	63.21	62.04
Bra024482.1-P	Field mustard	mitochondrion	63.21	62.04
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	63.21	62.04
KRH76667	Soybean	cytosol, plastid	86.79	60.93
KRH63924	Soybean	cytosol	29.25	39.24
CDY20904	Canola	cytosol, extracellular	46.23	38.58
KRH54020	Soybean	cytosol	28.3	37.5
KRH34853	Soybean	mitochondrion	33.96	30.51
KRH67711	Soybean	cytosol	29.25	29.25
KRH19939	Soybean	cytosol	33.02	28.46
KRH32539	Soybean	cytosol	32.08	27.2
KRG91926	Soybean	mitochondrion	31.13	26.4
KRG95997	Soybean	mitochondrion	31.13	26.4

Protein Annotations

EMBL:ACUP02010138	EnsemblPlants:KRH08093	EnsemblPlantsGene:GLYMA_16G129600	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:KRH08093	ProteinID:KRH08093.1
UniParc:UPI00023D6739	UniProt:I1MN71	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:28250448..28251269

Molecular Weight (calculated)

12143.6 Da

IEP (calculated)

7.510

GRAVY (calculated)

-0.391

Length

106 amino acids

Sequence
(BLAST)

001: MAIKKSNKLP QADVIKQIVR RCSSFGKKQQ GYNEEGGLPE DVPKGHFAVY VGENRTRYIV PISWLAHPQF QSLLQRAEEE FGFNHDMGLT IPCDEVVFEF
101: LTSMIR

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.