Factsheet for Bra011560.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69086	Canola	mitochondrion	98.13	98.13
AT4G34760.1	Thale cress	mitochondrion	96.26	96.26
Bra017676.1-P	Field mustard	mitochondrion	91.59	91.59
Bra034651.1-P	Field mustard	mitochondrion	87.85	90.38
Bra013061.1-P	Field mustard	mitochondrion	82.24	81.48
Bra033581.1-P	Field mustard	mitochondrion	78.5	80.77
Bra011889.1-P	Field mustard	mitochondrion	78.5	80.0
VIT_04s0023g03230.t01	Wine grape	mitochondrion	75.7	77.88
Solyc03g033590.1.1	Tomato	mitochondrion	71.96	77.78
Bra031171.1-P	Field mustard	mitochondrion	74.77	76.92
Bra015832.1-P	Field mustard	mitochondrion	76.64	75.93
KRH08093	Soybean	cytosol	74.77	75.47
PGSC0003DMT400058186	Potato	cytosol	70.09	75.0
KRH28787	Soybean	cytosol, mitochondrion	72.9	75.0
KRH69796	Soybean	cytosol	74.77	74.77
Bra017747.1-P	Field mustard	mitochondrion, plastid	69.16	74.75
Bra003746.1-P	Field mustard	mitochondrion	74.77	74.07
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	66.36	73.96
Bra008207.1-P	Field mustard	cytosol, mitochondrion	65.42	73.68
Bra010501.1-P	Field mustard	mitochondrion	71.03	73.08
PGSC0003DMT400075050	Potato	cytosol	65.42	72.92
Bra011662.1-P	Field mustard	mitochondrion, plastid	69.16	71.15
PGSC0003DMT400009439	Potato	mitochondrion	64.49	68.32
Solyc02g084010.1.1	Tomato	mitochondrion	64.49	67.65
Bra024482.1-P	Field mustard	mitochondrion	67.29	66.67
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	67.29	66.67
Bra039909.1-P	Field mustard	mitochondrion	67.29	66.67
Bra025770.1-P	Field mustard	cytosol, mitochondrion	65.42	61.95
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	56.07	60.0
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	52.34	53.33
KRH76667	Soybean	cytosol, plastid	71.03	50.33
Bra000682.1-P	Field mustard	cytosol	30.84	33.67
Bra009535.1-P	Field mustard	mitochondrion	29.91	29.91
Bra023093.1-P	Field mustard	cytosol	34.58	29.84
Bra017211.1-P	Field mustard	mitochondrion	32.71	29.66
Bra028841.1-P	Field mustard	mitochondrion	29.91	28.83
Bra005223.1-P	Field mustard	cytosol	32.71	28.0
Bra003125.1-P	Field mustard	cytosol	31.78	25.95
Bra006984.1-P	Field mustard	cytosol	30.84	25.38

Protein Annotations

EnsemblPlants:Bra011560.1	EnsemblPlants:Bra011560.1-P	EnsemblPlantsGene:Bra011560	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	UniParc:UPI0002545511	UniProt:M4D503
MapMan:35.1	:	:	:	:	:

Description

AT4G34760 (E=4e-057) | auxin-responsive family protein

Coordinates

chrA01:+:1680948..1681271

Molecular Weight (calculated)

12112.8 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.234

Length

107 amino acids

Sequence
(BLAST)

001: MAIMKKSSKL TQTAMLKQIL KRCSSLGKKN GGGYDEECLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQTLLSRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.