Factsheet for Bra009535.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70314	Canola	mitochondrion	100.0	100.0
Bra028841.1-P	Field mustard	mitochondrion	86.92	83.78
AT5G03310.1	Thale cress	mitochondrion	87.85	82.46
KRH67711	Soybean	cytosol	52.34	52.83
KRG95997	Soybean	mitochondrion	56.07	48.0
KRH19939	Soybean	cytosol	55.14	47.97
VIT_08s0040g01670.t01	Wine grape	mitochondrion	55.14	47.58
KRH32539	Soybean	cytosol	55.14	47.2
Bra023093.1-P	Field mustard	cytosol	53.27	45.97
Bra005223.1-P	Field mustard	cytosol	53.27	45.6
Bra017211.1-P	Field mustard	mitochondrion	49.53	44.92
Solyc09g007970.1.1	Tomato	cytosol	49.53	43.8
PGSC0003DMT400055533	Potato	cytosol	49.53	43.8
Solyc10g086200.1.1	Tomato	cytosol	46.73	40.65
Bra003125.1-P	Field mustard	cytosol	49.53	40.46
Bra006984.1-P	Field mustard	cytosol	48.6	40.0
PGSC0003DMT400080544	Potato	cytosol	43.93	38.52
Bra008207.1-P	Field mustard	cytosol, mitochondrion	31.78	35.79
Bra015832.1-P	Field mustard	mitochondrion	34.58	34.26
Bra003746.1-P	Field mustard	mitochondrion	34.58	34.26
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	29.91	32.0
Os04t0517900-01	Rice	mitochondrion	38.32	31.78
OQU81983	Sorghum	mitochondrion	37.38	31.75
Bra033581.1-P	Field mustard	mitochondrion	30.84	31.73
Bra011889.1-P	Field mustard	mitochondrion	29.91	30.48
Zm00001d003018_P001	Maize	mitochondrion	35.51	29.92
Bra011560.1-P	Field mustard	mitochondrion	29.91	29.91
Bra031171.1-P	Field mustard	mitochondrion	28.97	29.81
Bra011662.1-P	Field mustard	mitochondrion, plastid	28.04	28.85
Bra017747.1-P	Field mustard	mitochondrion, plastid	26.17	28.28
Bra017676.1-P	Field mustard	mitochondrion	28.04	28.04
Bra034651.1-P	Field mustard	mitochondrion	27.1	27.88
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.1	27.62
Bra025770.1-P	Field mustard	cytosol, mitochondrion	28.97	27.43
Bra010501.1-P	Field mustard	mitochondrion	26.17	26.92
Bra024482.1-P	Field mustard	mitochondrion	27.1	26.85
Bra013061.1-P	Field mustard	mitochondrion	27.1	26.85
Bra039909.1-P	Field mustard	mitochondrion	25.23	25.0
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.23	25.0
TraesCS2D01G377800.1	Wheat	plastid	35.51	24.52
TraesCS2B01G398600.1	Wheat	cytosol, plastid	34.58	24.5
TraesCS2A01G381300.1	Wheat	plastid	34.58	24.03
HORVU2Hr1G089400.1	Barley	plastid	34.58	23.57
GSMUA_Achr1P09150_001	Banana	nucleus	39.25	21.99
Bra000682.1-P	Field mustard	cytosol	19.63	21.43

Protein Annotations

EnsemblPlants:Bra009535.1	EnsemblPlants:Bra009535.1-P	EnsemblPlantsGene:Bra009535	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	UniParc:UPI0002547B5E	UniProt:M4CZ88
MapMan:35.2	:	:	:	:	:

Description

AT5G03310 (E=2e-050) | auxin-responsive family protein

Coordinates

chrA10:+:17135193..17135516

Molecular Weight (calculated)

12312.0 Da

IEP (calculated)

8.855

GRAVY (calculated)

-0.393

Length

107 amino acids

Sequence
(BLAST)

001: MMKKSKLITK AWKQMSSRIA KHRASTENLH IPHDVPKGHL VVYVGKEEES YKRFVIKITL LHDPTIRALL DQSKDEAYDD FTSGDSKLCI PCDEILFLEV
101: LRCASPR

Best Arabidopsis Sequence Match ( AT5G03310.1 )
(BLAST)

001: MMKKSKLIAK AWKQMSSRVA KHRVATGNPK DQYHIPHDVP KGHLVVYVGK DEETYKRFVI KITLLHDPIF RALLDQSKDE AYDDFTSGDS KLCIACDETL
101: FLEVLRCASP RYSL

Arabidopsis Description

Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LZF9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.