CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003018_P001	Maize	mitochondrion	88.1	87.4
Os04t0517900-01	Rice	mitochondrion	73.81	72.09
TraesCS2B01G398600.1	Wheat	cytosol, plastid	69.84	58.28
TraesCS2A01G381300.1	Wheat	plastid	69.05	56.49
HORVU2Hr1G089400.1	Barley	plastid	69.05	55.41
TraesCS2D01G377800.1	Wheat	plastid	67.46	54.84
KRH19939	Soybean	cytosol	43.65	44.72
AT2G37030.1	Thale cress	cytosol	42.06	42.74
KRH32539	Soybean	cytosol	42.06	42.4
VIT_08s0040g01670.t01	Wine grape	mitochondrion	41.27	41.94
Bra017211.1-P	Field mustard	mitochondrion	38.89	41.53
CDY18466	Canola	cytosol, mitochondrion	38.89	41.53
CDY46750	Canola	cytosol	40.48	41.13
Bra023093.1-P	Field mustard	cytosol	40.48	41.13
KRH67711	Soybean	cytosol	34.13	40.57
CDX79712	Canola	cytosol	39.68	40.32
KRG95997	Soybean	mitochondrion	39.68	40.0
CDX91329	Canola	cytosol	38.89	39.2
Bra005223.1-P	Field mustard	cytosol	38.89	39.2
CDX74993	Canola	cytosol	37.3	37.6
CDY10388	Canola	mitochondrion	31.75	37.38
Bra009535.1-P	Field mustard	mitochondrion	31.75	37.38
CDX70314	Canola	mitochondrion	31.75	37.38
Solyc09g007970.1.1	Tomato	cytosol	35.71	37.19
PGSC0003DMT400055533	Potato	cytosol	35.71	37.19
Bra028841.1-P	Field mustard	mitochondrion	31.75	36.04
CDY62892	Canola	mitochondrion	31.75	36.04
KRH34853	Soybean	mitochondrion	33.33	35.59
KXG19242	Sorghum	mitochondrion	35.71	35.43
CDY44355	Canola	mitochondrion	30.95	35.14
AT5G03310.1	Thale cress	mitochondrion	31.75	35.09
PGSC0003DMT400080544	Potato	cytosol	33.33	34.43
CDX67565	Canola	cytosol	35.71	34.35
Bra003125.1-P	Field mustard	cytosol	35.71	34.35
Bra006984.1-P	Field mustard	cytosol	34.92	33.85
CDX78160	Canola	cytosol	34.92	33.85
CDY13307	Canola	cytosol	34.92	33.59
Solyc10g086200.1.1	Tomato	cytosol	32.54	33.33
CDX73568	Canola	cytosol	33.33	32.31
KRG91926	Soybean	mitochondrion	30.95	31.2
GSMUA_Achr1P09150_001	Banana	nucleus	41.27	27.23
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	33.33	27.1

Protein Annotations

EnsemblPlants:OQU81983	EnsemblPlantsGene:SORBI_3006G148600	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	ProteinID:OQU81983	ProteinID:OQU81983.1	SEG:seg
UniParc:UPI0003C70012	UniProt:A0A1Z5RE01	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51028023..51028403

Molecular Weight (calculated)

13967.6 Da

IEP (calculated)

6.098

GRAVY (calculated)

-0.133

Length

126 amino acids

Sequence
(BLAST)

001: MKAGSSKGRF LNLKAFLHAW KKLAAAETAT ASAAGWAQLD GDGETIPRDV PKGHTVVYVG EELRRYVVRV SSLDHPLFRE LLDRARDEYG FAAADTRLCL
101: PCDEDMFLAV LCHVDAEREW SLALCS

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.