Factsheet for Bra006984.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78160	Canola	cytosol	100.0	100.0
CDX73568	Canola	cytosol	97.69	97.69
Bra003125.1-P	Field mustard	cytosol	90.77	90.08
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	84.62	70.97
Bra005223.1-P	Field mustard	cytosol	64.62	67.2
Bra023093.1-P	Field mustard	cytosol	63.85	66.94
Bra017211.1-P	Field mustard	mitochondrion	60.0	66.1
PGSC0003DMT400055533	Potato	cytosol	53.08	57.02
Solyc09g007970.1.1	Tomato	cytosol	53.08	57.02
KRH19939	Soybean	cytosol	53.08	56.1
PGSC0003DMT400080544	Potato	cytosol	52.31	55.74
Solyc10g086200.1.1	Tomato	cytosol	52.31	55.28
VIT_08s0040g01670.t01	Wine grape	mitochondrion	52.31	54.84
KRH32539	Soybean	cytosol	52.31	54.4
KRH67711	Soybean	cytosol	42.31	51.89
KRG95997	Soybean	mitochondrion	47.69	49.6
Bra009535.1-P	Field mustard	mitochondrion	40.0	48.6
Bra028841.1-P	Field mustard	mitochondrion	38.46	45.05
Zm00001d003018_P001	Maize	mitochondrion	34.62	35.43
OQU81983	Sorghum	mitochondrion	33.85	34.92
Os04t0517900-01	Rice	mitochondrion	33.85	34.11
Bra015832.1-P	Field mustard	mitochondrion	27.69	33.33
Bra003746.1-P	Field mustard	mitochondrion	27.69	33.33
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.38	33.0
Bra008207.1-P	Field mustard	cytosol, mitochondrion	23.85	32.63
Bra017747.1-P	Field mustard	mitochondrion, plastid	23.85	31.31
Bra011560.1-P	Field mustard	mitochondrion	25.38	30.84
Bra034651.1-P	Field mustard	mitochondrion	24.62	30.77
Bra033581.1-P	Field mustard	mitochondrion	24.62	30.77
Bra031171.1-P	Field mustard	mitochondrion	24.62	30.77
Bra011889.1-P	Field mustard	mitochondrion	24.62	30.48
Bra010501.1-P	Field mustard	mitochondrion	23.85	29.81
Bra011662.1-P	Field mustard	mitochondrion, plastid	23.85	29.81
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	23.85	29.52
Bra025770.1-P	Field mustard	cytosol, mitochondrion	25.38	29.2
Bra017676.1-P	Field mustard	mitochondrion	23.08	28.04
Bra013061.1-P	Field mustard	mitochondrion	23.08	27.78
Bra000682.1-P	Field mustard	cytosol	20.77	27.55
Bra039909.1-P	Field mustard	mitochondrion	22.31	26.85
Bra024482.1-P	Field mustard	mitochondrion	22.31	26.85
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	21.54	25.93
TraesCS2B01G398600.1	Wheat	cytosol, plastid	28.46	24.5
HORVU2Hr1G089400.1	Barley	plastid	29.23	24.2
TraesCS2A01G381300.1	Wheat	plastid	28.46	24.03
TraesCS2D01G377800.1	Wheat	plastid	27.69	23.23
GSMUA_Achr1P09150_001	Banana	nucleus	33.08	22.51

Protein Annotations

EnsemblPlants:Bra006984.1	EnsemblPlants:Bra006984.1-P	EnsemblPlantsGene:Bra006984	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	UniParc:UPI0002542F1B	UniProt:M4CRZ2
MapMan:35.2	:	:	:	:	:

Description

AT3G53250 (E=3e-055) | auxin-responsive family protein

Coordinates

chrA09:+:26666681..26667073

Molecular Weight (calculated)

14881.2 Da

IEP (calculated)

8.758

GRAVY (calculated)

-0.312

Length

130 amino acids

Sequence
(BLAST)

001: MKNKFIKACE NKLKTMKSKS IVIPCTSSFC ESCCEKVAWG FKKENEAIPK DVPRGHLVVY VGDDHKRFVI KMSLLKHPIF KALLDQAQDA YDFSSDSSRL
101: WIPCDENTFL DVVRCSGAPQ HQRKCIGMYM

Best Arabidopsis Sequence Match ( AT3G53250.2 )
(BLAST)

001: MYFTIVLLIT KPSLSLFYSS FIFETSHSIL KMKNKFIKSC ENKFRIMKSK SIVLPCCTSS CESCCDKVSW GFKKENEAIP KDVPRGHLVV YVGDDYKRFV
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQF0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.