Factsheet for Bra037178.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18596	Canola	cytosol, mitochondrion, nucleus	100.0	100.0
CDX81404	Canola	cytosol, mitochondrion, nucleus	98.0	98.0
AT5G66260.1	Thale cress	cytosol	90.0	90.91
Bra008207.1-P	Field mustard	cytosol, mitochondrion	57.0	60.0
Bra017747.1-P	Field mustard	mitochondrion, plastid	59.0	59.6
Bra034651.1-P	Field mustard	mitochondrion	61.0	58.65
Bra031171.1-P	Field mustard	mitochondrion	59.0	56.73
Bra010501.1-P	Field mustard	mitochondrion	59.0	56.73
Bra011889.1-P	Field mustard	mitochondrion	59.0	56.19
Bra011560.1-P	Field mustard	mitochondrion	60.0	56.07
Bra015832.1-P	Field mustard	mitochondrion	60.0	55.56
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	58.0	55.24
Bra013061.1-P	Field mustard	mitochondrion	59.0	54.63
Bra017676.1-P	Field mustard	mitochondrion	58.0	54.21
Bra011662.1-P	Field mustard	mitochondrion, plastid	56.0	53.85
Bra033581.1-P	Field mustard	mitochondrion	56.0	53.85
Bra003746.1-P	Field mustard	mitochondrion	57.0	52.78
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	56.0	51.85
Bra039909.1-P	Field mustard	mitochondrion	56.0	51.85
Bra024482.1-P	Field mustard	mitochondrion	55.0	50.93
Bra025770.1-P	Field mustard	cytosol, mitochondrion	53.0	46.9
Bra000682.1-P	Field mustard	cytosol	31.0	31.63
Bra009535.1-P	Field mustard	mitochondrion	32.0	29.91
Bra017211.1-P	Field mustard	mitochondrion	34.0	28.81
Bra023093.1-P	Field mustard	cytosol	35.0	28.23
Bra028841.1-P	Field mustard	mitochondrion	31.0	27.93
Bra005223.1-P	Field mustard	cytosol	34.0	27.2
Bra006984.1-P	Field mustard	cytosol	33.0	25.38
Bra003125.1-P	Field mustard	cytosol	33.0	25.19

Protein Annotations

EnsemblPlants:Bra037178.1	EnsemblPlants:Bra037178.1-P	EnsemblPlantsGene:Bra037178	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF35	PFAM:PF02519	UniParc:UPI0002541C94	UniProt:M4F7W7
MapMan:35.1	:	:	:	:	:

Description

AT5G66260 (E=8e-048) | auxin-responsive protein, putative

Coordinates

chrA09:+:4128020..4128412

Molecular Weight (calculated)

11151.5 Da

IEP (calculated)

9.292

GRAVY (calculated)

-0.165

Length

100 amino acids

Sequence
(BLAST)

1: MGVERGSGKG LKQMLKRCSS LGKKSNVHVN SNGVPKGHFV VYVGLSRSRH VIPISFLTHP IFQMLLRQSE EEFGFYQDNG LTIPCDEDFF LSLISSINPP

Best Arabidopsis Sequence Match ( AT5G66260.1 )
(BLAST)

1: MGVERGSGKG LKQMLKRCSS LGKKSSVDVN FNGVPKGHFV VYVGHSRSRH VIPISFLTHP IFQMLLQQSE EEFGFFQDNG LTIPCDEHFF RALISSINP

Arabidopsis Description

Auxin-induced protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FH62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.