Factsheet for Bra011662.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000872.1-P
Bra018539.1-P
Bra036256.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36110.1	Bra000872.1-P	AT4G02590.1	21798944
AT4G36110.1	Bra018539.1-P	AT4G02590.1	21798944
AT4G36110.1	Bra036256.1-P	AT4G02590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69199	Canola	mitochondrion, plastid	100.0	100.0
CDX75553	Canola	mitochondrion, plastid	100.0	100.0
Bra010501.1-P	Field mustard	mitochondrion	90.38	90.38
Bra017747.1-P	Field mustard	mitochondrion, plastid	83.65	87.88
AT4G36110.1	Thale cress	mitochondrion	86.54	86.54
Bra039909.1-P	Field mustard	mitochondrion	72.12	69.44
Bra011560.1-P	Field mustard	mitochondrion	71.15	69.16
Bra024482.1-P	Field mustard	mitochondrion	71.15	68.52
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	70.19	67.59
VIT_04s0023g03230.t01	Wine grape	mitochondrion	67.31	67.31
Bra034651.1-P	Field mustard	mitochondrion	67.31	67.31
Solyc03g033590.1.1	Tomato	mitochondrion	63.46	66.67
Bra015832.1-P	Field mustard	mitochondrion	68.27	65.74
Bra003746.1-P	Field mustard	mitochondrion	68.27	65.74
KRH28787	Soybean	cytosol, mitochondrion	65.38	65.38
Bra008207.1-P	Field mustard	cytosol, mitochondrion	59.62	65.26
KRH08093	Soybean	cytosol	66.35	65.09
PGSC0003DMT400058186	Potato	cytosol	62.5	65.0
Bra011889.1-P	Field mustard	mitochondrion	65.38	64.76
PGSC0003DMT400075050	Potato	cytosol	59.62	64.58
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	59.62	64.58
Bra017676.1-P	Field mustard	mitochondrion	66.35	64.49
KRH69796	Soybean	cytosol	66.35	64.49
Bra033581.1-P	Field mustard	mitochondrion	63.46	63.46
PGSC0003DMT400009439	Potato	mitochondrion	59.62	61.39
Bra013061.1-P	Field mustard	mitochondrion	63.46	61.11
Bra031171.1-P	Field mustard	mitochondrion	60.58	60.58
Solyc02g084010.1.1	Tomato	mitochondrion	58.65	59.8
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	53.85	56.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	57.69	53.1
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	51.92	51.43
KRH76667	Soybean	cytosol, plastid	64.42	44.37
Bra000682.1-P	Field mustard	cytosol	30.77	32.65
Bra017211.1-P	Field mustard	mitochondrion	32.69	28.81
Bra009535.1-P	Field mustard	mitochondrion	28.85	28.04
Bra023093.1-P	Field mustard	cytosol	31.73	26.61
Bra005223.1-P	Field mustard	cytosol	31.73	26.4
Bra028841.1-P	Field mustard	mitochondrion	26.92	25.23
Bra003125.1-P	Field mustard	cytosol	31.73	25.19
Bra006984.1-P	Field mustard	cytosol	29.81	23.85

Protein Annotations

EnsemblPlants:Bra011662.1	EnsemblPlants:Bra011662.1-P	EnsemblPlantsGene:Bra011662	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF41	PFAM:PF02519	UniParc:UPI0002546BA8	UniProt:M4D5A5
MapMan:35.1	:	:	:	:	:

Description

AT4G36110 (E=8e-050) | auxin-responsive protein, putative

Coordinates

chrA01:-:1200661..1200975

Molecular Weight (calculated)

11736.3 Da

IEP (calculated)

9.258

GRAVY (calculated)

-0.171

Length

104 amino acids

Sequence
(BLAST)

001: MAIKKSNKVA ASQAATIKKL LKRCSSLGKK NQGNCYFSDV PKGHFPVYVG QQRSRYVVPI AWLAHPEFQT LLQLAEEEFG FEHEMGLTIP CDEAVFQSLI
101: SMFR

Best Arabidopsis Sequence Match ( AT4G36110.1 )
(BLAST)

001: MAIKKSNKAA LSQAASLKQI LKRCSSLGKK NQGNCYFNDV PKGHFPVYVG QHRSRYVVPI SWLDHHEFQS LLQLAEEEFG FEHEMGLTIP CDEVVFRSLI
101: SMFR

Arabidopsis Description

SAUR9 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.