Factsheet for Bra036256.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000276.1-P
Bra004712.1-P
Bra006236.1-P
Bra008673.1-P
Bra008782.1-P
Bra013885.1-P
Bra016854.1-P
Bra019176.1-P
Bra019509.1-P
Bra023448.1-P
Bra025066.1-P
Bra033788.1-P
Bra035058.1-P
Bra039224.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02590.1	Bra035058.1-P	AT1G78680.1	21798944
AT4G02590.1	Bra039224.1-P	AT2G24020.1	21798944
AT4G02590.1	Bra000276.1-P	AT2G42870.1	21798944
AT4G02590.1	Bra004712.1-P	AT2G42870.1	21798944
AT4G02590.1	Bra016854.1-P	AT2G42870.1	21798944
AT4G02590.1	Bra019509.1-P	AT3G47640.1	21798944
AT4G02590.1	Bra033788.1-P	AT3G47640.1	21798944
AT4G02590.1	Bra013885.1-P	AT4G25315.1	21798944
AT4G02590.1	Bra019176.1-P	AT4G25315.1	21798944
AT4G02590.1	Bra006236.1-P	AT5G14070.1	21798944
AT4G02590.1	Bra008782.1-P	AT5G14070.1	21798944
AT4G02590.1	Bra023448.1-P	AT5G14070.1	21798944
AT4G02590.1	Bra008673.1-P	AT5G15802.1	21798944
AT4G02590.1	Bra025066.1-P	AT5G45620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018539.1-P	Field mustard	nucleus	90.35	81.1
CDY22062	Canola	nucleus	98.68	74.01
Os07t0182200-01	Rice	cytosol	43.86	73.53
AT4G02590.1	Thale cress	nucleus	93.42	68.71
KRH55381	Soybean	cytosol	20.61	68.12
Bra000872.1-P	Field mustard	nucleus	91.23	67.31
KRH32094	Soybean	nucleus	78.95	63.6
KRG95612	Soybean	nucleus	80.26	62.67
VIT_07s0141g00220.t01	Wine grape	nucleus	78.95	62.28
Bra033368.1-P	Field mustard	nucleus	84.65	62.06
KRH67287	Soybean	nucleus	78.95	61.64
PGSC0003DMT400049768	Potato	nucleus	80.26	60.6
Solyc09g065820.2.1	Tomato	nucleus	79.82	60.26
Zm00001d013073_P002	Maize	nucleus	64.91	51.93
KXG37359	Sorghum	nucleus	64.47	51.76
OQU88567	Sorghum	nucleus	62.72	51.62
Os03t0797600-01	Rice	nucleus	65.79	51.02
TraesCS5B01G445900.1	Wheat	nucleus	62.72	50.89
TraesCS5D01G449200.1	Wheat	nucleus	62.72	50.89
GSMUA_Achr5P03100_001	Banana	nucleus	60.96	50.73
Zm00001d018967_P001	Maize	nucleus	63.16	50.53
GSMUA_Achr4P21070_001	Banana	nucleus	66.23	50.33
TraesCS5A01G441900.1	Wheat	nucleus	60.09	48.75
HORVU5Hr1G106310.3	Barley	nucleus	60.96	44.55
Bra011237.1-P	Field mustard	plastid	41.67	43.98
GSMUA_Achr9P25560_001	Banana	nucleus	65.35	42.21
Bra020398.1-P	Field mustard	nucleus	42.54	34.64
Bra002679.1-P	Field mustard	nucleus	42.11	33.22
Bra006788.1-P	Field mustard	nucleus	41.23	31.33
Bra007863.1-P	Field mustard	nucleus	44.3	29.88
Bra032111.1-P	Field mustard	nucleus	45.18	29.6
Bra012133.1-P	Field mustard	nucleus, plastid	15.79	16.82
Bra037312.1-P	Field mustard	nucleus	14.91	16.27
Bra010591.1-P	Field mustard	nucleus, plastid	18.86	12.61
Bra011740.1-P	Field mustard	nucleus, plastid	18.42	11.86
Bra004489.1-P	Field mustard	nucleus	18.42	10.5
Bra037742.1-P	Field mustard	nucleus	18.42	10.34
Bra003483.1-P	Field mustard	nucleus	13.6	10.1
Bra000283.1-P	Field mustard	nucleus	17.98	9.93
Bra000560.1-P	Field mustard	nucleus	16.67	9.79
Bra007430.1-P	Field mustard	nucleus	17.98	9.62
Bra000436.1-P	Field mustard	nucleus	16.67	9.41
Bra031668.1-P	Field mustard	nucleus	17.98	8.33
Bra020017.1-P	Field mustard	nucleus	17.98	8.3
Bra007660.1-P	Field mustard	nucleus	13.6	7.35
Bra011061.1-P	Field mustard	nucleus	14.91	6.58
Bra011062.1-P	Field mustard	cytosol	11.4	5.68

Protein Annotations

EnsemblPlants:Bra036256.1	EnsemblPlants:Bra036256.1-P	EnsemblPlantsGene:Bra036256	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR16223	PANTHER:PTHR16223:SF15	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002541F21	UniProt:M4F5A0	MapMan:15.5.32	:	:

Description

AT4G02590 (E=5e-087) UNE12 | UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor

Coordinates

chrA09:+:133277..134997

Molecular Weight (calculated)

24921.1 Da

IEP (calculated)

9.628

GRAVY (calculated)

-0.485

Length

228 amino acids

Sequence
(BLAST)

001: MFPLGLSHEQ GKGQGFLRTE GGSLGTGKRF SDDVMKPVFH GQPMQQQPAP AAPHQPTSIR PRVRARRGQA TDPHSIAERL RRERIAERIR ALQELVPTVN
101: KTDRAAMIDE IVDYVKFLRL QVKVLSMSRL GGAGAVAPLV TDMPLSSSVE DESGEGGRAP QPAWEKWSND GTERQVAKLM EENVGAAMQL LQSKALCMMP
201: ISLAMAIYHS QPPDTSSVVK PETNPPPP

Best Arabidopsis Sequence Match ( AT4G02590.2 )
(BLAST)

001: MASNNPHDNL SDQTPSDDFF EQILGLPNFS ASSAAGLSGV DGGLGGGAPP MMLQLGSGEE GSHMGGLGGS GPTGFHNQMF PLGLSLDQGK GPGFLRPEGG
101: HGSGKRFSDD VVDNRCSSMK PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP TVNKTDRAAM IDEIVDYVKF
201: LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301: VVKPENNPPQ

Arabidopsis Description

UNE12Transcription factor UNE12 [Source:UniProtKB/Swiss-Prot;Acc:O22768]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.