Factsheet for Os03t0797600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0511300-01
Os01t0587000-01
Os02t0180200-01
Os02t0512400-01
Os03t0214600-01
Os03t0379300-01
Os03t0414400-01
Os04t0393500-01
Os05t0105800-01
Os05t0517500-01
Os07t0628500-01
Os08t0494375-00
Os09t0516800-01
Os11t0601700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02590.1	Os05t0105800-01	AT1G22630.1	21798944
AT4G02590.1	Os05t0517500-01	AT1G78680.1	21798944
AT4G02590.1	Os02t0180200-01	AT2G24020.1	21798944
AT4G02590.1	Os01t0587000-01	AT3G28715.1	21798944
AT4G02590.1	Os03t0379300-01	AT3G47640.1	21798944
AT4G02590.1	Os07t0628500-01	AT3G47640.1	21798944
AT4G02590.1	Os08t0494375-00	AT3G47640.1	21798944
AT4G02590.1	Os11t0601700-01	AT3G47640.1	21798944
AT4G02590.1	Os09t0516800-01	AT4G25315.1	21798944
AT4G02590.1	Os02t0512400-01	AT5G14070.1	21798944
AT4G02590.1	Os04t0393500-01	AT5G14070.1	21798944
AT4G02590.1	Os03t0414400-01	AT5G15802.1	21798944
AT4G02590.1	Os01t0511300-01	AT5G45620.1	21798944
AT4G02590.1	Os03t0214600-01	AT5G45620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0182200-01	Rice	cytosol	42.86	92.65
Zm00001d013073_P002	Maize	nucleus	86.73	89.47
GSMUA_Achr5P03100_001	Banana	nucleus	65.65	70.44
GSMUA_Achr4P21070_001	Banana	nucleus	70.41	69.0
Bra036256.1-P	Field mustard	nucleus	51.02	65.79
KRH55381	Soybean	cytosol	14.63	62.32
KRH32094	Soybean	nucleus	56.12	58.3
Bra018539.1-P	Field mustard	nucleus	49.66	57.48
VIT_05s0020g04620.t01	Wine grape	nucleus	60.2	56.55
VIT_07s0141g00220.t01	Wine grape	nucleus	55.44	56.4
KRG95612	Soybean	nucleus	55.78	56.16
KRH67287	Soybean	nucleus	55.44	55.82
CDX91293	Canola	nucleus	56.12	55.37
CDY21898	Canola	nucleus	55.78	54.49
CDY22062	Canola	nucleus	55.44	53.62
PGSC0003DMT400049768	Potato	nucleus	54.76	53.31
Solyc09g065820.2.1	Tomato	nucleus	54.42	52.98
CDY18011	Canola	nucleus	54.76	52.96
AT4G02590.1	Thale cress	nucleus	55.78	52.9
CDX97278	Canola	nucleus	53.4	52.51
Bra000872.1-P	Field mustard	nucleus	55.1	52.43
VIT_14s0030g02230.t01	Wine grape	nucleus	58.84	52.27
CDX90930	Canola	nucleus	55.1	52.26
PGSC0003DMT400034840	Potato	nucleus	52.38	52.03
PGSC0003DMT400015596	Potato	nucleus	53.06	51.49
Solyc09g083220.2.1	Tomato	nucleus	53.06	51.32
CDY18143	Canola	nucleus	53.4	51.31
Bra033368.1-P	Field mustard	nucleus	53.4	50.48
CDX89919	Canola	nucleus	53.4	50.48
Solyc03g005350.2.1	Tomato	nucleus	50.68	50.34
KRG92679	Soybean	nucleus	54.08	47.89
KRH34087	Soybean	nucleus	53.4	47.87
AT1G03040.3	Thale cress	nucleus	52.72	46.55
Os06t0184000-00	Rice	nucleus	42.86	31.66
Os02t0795800-00	Rice	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.25	30.71
Os04t0618600-01	Rice	nucleus	13.61	22.1
Os06t0193400-01	Rice	nucleus	34.69	21.34
Os02t0564700-01	Rice	nucleus	34.69	19.47
Os06t0164400-01	Rice	cytosol, mitochondrion, nucleus	11.22	16.75
Os02t0805250-00	Rice	nucleus	14.29	15.0
Os12t0610200-01	Rice	nucleus	17.01	11.24
Os03t0782500-01	Rice	nucleus	15.65	11.22
Os07t0143200-01	Rice	nucleus	14.97	10.63
Os10t0556200-01	Rice	nucleus	15.99	10.11
Os05t0139100-01	Rice	nucleus	15.65	9.11
Os01t0286100-01	Rice	nucleus	17.69	8.16
Os03t0639300-01	Rice	nucleus	2.72	2.61

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:4334429	ProteinID:AAP44685.1	ProteinID:ABF99356.1	EMBL:AK104412
ProteinID:BAF13477.1	ProteinID:BAS86855.1	GO:GO:0001046	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	EnsemblPlantsGene:Os03g0797600	EnsemblPlants:Os03t0797600-01	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223
PANTHER:PTHR16223:SF103	UniProt:Q7Y1H4	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000019C5B4	RefSeq:XP_015633087.1
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

basic helix-loop-helix protein 098Similar to Helix-loop-helix protein homolog. (Os03t0797600-01);Similar to BHLH transcription factor. (Os03t0797600-02)

Coordinates

chr3:+:33233106..33236943

Molecular Weight (calculated)

31265.0 Da

IEP (calculated)

5.810

GRAVY (calculated)

-0.488

Length

294 amino acids

Sequence
(BLAST)

001: MAGQQPQQQG PPEDDFFDQF FSLTSSFPGA APGGRAAGDQ PFSLALSLDA AAAAEASGSG KRLGVGDDAE GGGSKADRET VQLTGLFPPV FGGGGVQPPN
101: LRPTPPTQVF HPQQSKQGGA AVGPQPPAPR PKVRARRGQA TDPHSIAERL RRERIAERMR ALQELVPNTN KTDRAAMLDE ILDYVKFLRL QVKVLSMSRL
201: GGAGAVAQLV ADIPLSVKGE ASDSGGNQQI WEKWSTDGTE RQVAKLMEED IGAAMQFLQS KALCMMPISL AMAIYDTQQT QDGQPVKHEP NTPS

Best Arabidopsis Sequence Match ( AT4G02590.2 )
(BLAST)

001: MASNNPHDNL SDQTPSDDFF EQILGLPNFS ASSAAGLSGV DGGLGGGAPP MMLQLGSGEE GSHMGGLGGS GPTGFHNQMF PLGLSLDQGK GPGFLRPEGG
101: HGSGKRFSDD VVDNRCSSMK PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP TVNKTDRAAM IDEIVDYVKF
201: LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301: VVKPENNPPQ

Arabidopsis Description

UNE12Transcription factor UNE12 [Source:UniProtKB/Swiss-Prot;Acc:O22768]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.