Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0610200-01 | Rice | nucleus | 38.11 | 26.29 |
| Os03t0782500-01 | Rice | nucleus | 13.68 | 10.24 |
| Zm00001d029897_P001 | Maize | nucleus | 8.47 | 9.52 |
| Os07t0143200-01 | Rice | nucleus | 12.38 | 9.18 |
| KRH05051 | Soybean | nucleus | 11.4 | 8.75 |
| Os05t0139100-01 | Rice | nucleus | 12.7 | 7.72 |
| Os01t0286100-01 | Rice | nucleus | 14.01 | 6.75 |
| Os10t0556200-01 | Rice | nucleus | 10.1 | 6.67 |
| Os06t0184000-00 | Rice | nucleus | 6.84 | 5.28 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 2.61 | 4.06 |
| Os02t0805250-00 | Rice | nucleus | 3.26 | 3.57 |
| Os02t0795800-00 | Rice | endoplasmic reticulum, mitochondrion, nucleus, plastid | 2.93 | 3.21 |
| Os06t0193400-01 | Rice | nucleus | 4.89 | 3.14 |
| Os02t0564700-01 | Rice | nucleus | 5.21 | 3.05 |
| Os03t0797600-01 | Rice | nucleus | 2.61 | 2.72 |
| Os04t0618600-01 | Rice | nucleus | 0.33 | 0.55 |
| Os07t0182200-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | ProteinID:AAT77869.1 | ProteinID:BAH92286.1 | ProteinID:BAS85417.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046983 | EnsemblPlantsGene:Os03g0639300 | EnsemblPlants:Os03t0639300-01 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF194 |
| UniProt:Q6AUE8 | UniParc:UPI00003FE6A8 | SEG:seg | : | : | : |
Description
PIL12Similar to Helix-loop-helix DNA-binding domain containing protein, expressed. (Os03t0639300-01)
Coordinates
chr3:+:24544511..24549550
Molecular Weight (calculated)
31576.1 Da
IEP (calculated)
5.068
GRAVY (calculated)
-0.652
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQFVPDWSN MGDASRTLGE DDNLIELLWC NGHVVMQSQN HHRKLPPRPP EKAAAAAVQE DEAGLWFPFA LADSLEKDIF SDLFYEAPVA ATAEAAPAGP
101: GAGADGEGKT CKGDAAMAEE ERGGPGAASE APRELMPPPK STNASCSRQQ TMSLADGGDN AGDLSELVRA RRSSGGAARR KAEAGGGGGG ASSSMLSAIG
201: SSICGSNQVQ VQQRTASEPG RRGAPPSAVG SANAIPCGGR DHGHGHEATT VASSSGRSNC CFGTTTTTEP TSTSNRSSKR KRLDTTEDSE SPSEVGVLPS
301: NTNRDAH
101: GAGADGEGKT CKGDAAMAEE ERGGPGAASE APRELMPPPK STNASCSRQQ TMSLADGGDN AGDLSELVRA RRSSGGAARR KAEAGGGGGG ASSSMLSAIG
201: SSICGSNQVQ VQQRTASEPG RRGAPPSAVG SANAIPCGGR DHGHGHEATT VASSSGRSNC CFGTTTTTEP TSTSNRSSKR KRLDTTEDSE SPSEVGVLPS
301: NTNRDAH
001: MHHFVPDFDT DDDYVNNHNS SLNHLPRKSI TTMGEDDDLM ELLWQNGQVV VQNQRLHTKK PSSSPPKLLP SMDPQQQPSS DQNLFIQEDE MTSWLHYPLR
101: DDDFCSDLLF SAAPTATATA TVSQVTAARP PVSSTNESRP PVRNFMNFSR LRGDFNNGRG GESGPLLSKA VVRESTQVSP SATPSAAASE SGLTRRTDGT
201: DSSAVAGGGA YNRKGKAVAM TAPAIEITGT SSSVVSKSEI EPEKTNVDDR KRKEREATTT DETESRSEET KQARVSTTST KRSRAAEVHN LSERKRRDRI
301: NERMKALQEL IPRCNKSDKA SMLDEAIEYM KSLQLQIQVH FL
101: DDDFCSDLLF SAAPTATATA TVSQVTAARP PVSSTNESRP PVRNFMNFSR LRGDFNNGRG GESGPLLSKA VVRESTQVSP SATPSAAASE SGLTRRTDGT
201: DSSAVAGGGA YNRKGKAVAM TAPAIEITGT SSSVVSKSEI EPEKTNVDDR KRKEREATTT DETESRSEET KQARVSTTST KRSRAAEVHN LSERKRRDRI
301: NERMKALQEL IPRCNKSDKA SMLDEAIEYM KSLQLQIQVH FL
Arabidopsis Description
PIF1Transcription factor PIF1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.