Factsheet for Os02t0564700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30460	Sorghum	nucleus	54.01	55.93
Zm00001d016873_P001	Maize	nucleus	52.1	55.83
Os07t0182200-01	Rice	cytosol	12.98	50.0
GSMUA_Achr9P18080_001	Banana	nucleus	35.69	38.56
Bra020398.1-P	Field mustard	nucleus	20.42	38.21
CDY11836	Canola	nucleus	20.42	37.41
Bra006788.1-P	Field mustard	nucleus	20.8	36.33
CDX88653	Canola	nucleus	20.8	36.33
Bra002679.1-P	Field mustard	nucleus	20.04	36.33
CDY55014	Canola	nucleus	20.04	36.33
Os06t0193400-01	Rice	nucleus	33.02	36.19
AT5G58010.1	Thale cress	nucleus	20.42	36.03
CDY02785	Canola	nucleus	20.23	35.81
CDY32733	Canola	nucleus	20.42	35.43
GSMUA_Achr3P10120_001	Banana	nucleus	36.45	35.05
CDY62262	Canola	nucleus	20.04	34.77
Os03t0797600-01	Rice	nucleus	19.47	34.69
VIT_11s0016g00380.t01	Wine grape	nucleus	34.35	33.58
Os06t0184000-00	Rice	nucleus	24.43	32.16
Os02t0795800-00	Rice	endoplasmic reticulum, mitochondrion, nucleus, plastid	15.84	29.64
Os06t0164400-01	Rice	cytosol, mitochondrion, nucleus	8.02	21.32
Os04t0618600-01	Rice	nucleus	7.06	20.44
Os02t0805250-00	Rice	nucleus	8.4	15.71
Os03t0782500-01	Rice	nucleus	10.5	13.41
Os12t0610200-01	Rice	nucleus	10.11	11.91
Os07t0143200-01	Rice	nucleus	9.35	11.84
Os10t0556200-01	Rice	nucleus	9.92	11.18
Os05t0139100-01	Rice	nucleus	10.31	10.69
Os01t0286100-01	Rice	nucleus	12.02	9.89
Os03t0639300-01	Rice	nucleus	3.05	5.21

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:4329698	EMBL:AK241924	ProteinID:BAD15821.1	ProteinID:BAS79292.1
ProteinID:EEE57212.1	GO:GO:0001046	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
EnsemblPlantsGene:Os02g0564700	EnsemblPlants:Os02t0564700-01	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF28
UniProt:Q6Z7E7	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0000358B96	RefSeq:XP_015623831.1	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

basic helix-loop-helix protein 097Similar to BHLH transcription factor. (Os02t0564700-01)

Coordinates

chr2:-:21436299..21440664

Molecular Weight (calculated)

54722.2 Da

IEP (calculated)

5.103

GRAVY (calculated)

-0.363

Length

524 amino acids

Sequence
(BLAST)

001: MGGFAYPFTP SPAWSRDAVF AGSPWAAGGV SSLADALVSY GAVDDEEAAF LGKTAASSPS TARLHEQQQL LLEAELLRHG DGLGFAAMDD DGGAAMLGAL
101: EPCAMPLTDS GGPPVICSSS SNDSSGSEHS AAMPAGGGFL VGEQQQHVPP AAYAAGGVLP SMAAGEETPQ SFGFGSLFNG DLLQEATVSK YHHHQQQQQL
201: GVVPSSQPHH LNDDIDFNTG KLMSFASGQQ HVTPSIDSLQ IDQKEFSSGL HHLNLSSLIS GPLASFNATQ SHRQPAEACG GKNGGAAPFV NLSEVLPKGN
301: GSGSAGNGAP KPRVRARRGQ ATDPHSIAER LRREKISDRM KDLQELVPNS NKTNKASMLD EIIDYVKFLQ LQVKVLSMSR LGAAEAVVPL LTETQTESPG
401: FLLSPRSSSG ERQAGAGAVT GGLPGDQPEL LDGGAMFEQE VVKLMEDNMT TAMQYLQSKG LCLMPVALAS AISAQKGTSS AAVRPEKKKN GDGDGGGDEE
501: DVKGEFDAPR RPPVGRPKEM RSRV

Best Arabidopsis Sequence Match ( AT5G58010.1 )
(BLAST)

001: MENGNGEGKG EFINQNNDFF LDSMSMLSSL PPCWDPSLPP PPPPPQSLFH ALAVDAPFPD QFHHPQESGG PTMGSQEGLQ PQGTVSTTSA PVVRQKPRVR
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA

Arabidopsis Description

BHLH82LRL3 [Source:UniProtKB/TrEMBL;Acc:A0A178UI77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.