Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002679.1-P | Field mustard | nucleus | 92.38 | 96.54 |
| CDY55014 | Canola | nucleus | 92.38 | 96.54 |
| CDY02785 | Canola | nucleus | 85.76 | 87.5 |
| CDX88653 | Canola | nucleus | 83.77 | 84.33 |
| CDY11836 | Canola | nucleus | 79.14 | 83.57 |
| CDY32733 | Canola | nucleus | 82.45 | 82.45 |
| AT5G58010.1 | Thale cress | nucleus | 79.47 | 80.81 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 29.47 | 43.84 |
| CDY46132 | Canola | endoplasmic reticulum | 25.5 | 43.75 |
| CDY37185 | Canola | mitochondrion | 12.91 | 39.8 |
| CDX68710 | Canola | nucleus | 43.05 | 39.76 |
| CDY28232 | Canola | nucleus | 43.05 | 39.76 |
| CDX76819 | Canola | nucleus | 42.38 | 37.65 |
| CDY34780 | Canola | nucleus | 41.72 | 37.28 |
| CDX91293 | Canola | nucleus | 35.1 | 35.57 |
| CDY21898 | Canola | nucleus | 34.44 | 34.55 |
| CDY22062 | Canola | nucleus | 34.44 | 34.21 |
| CDY18011 | Canola | nucleus | 34.44 | 34.21 |
| CDX97278 | Canola | nucleus | 33.77 | 34.11 |
| CDX90930 | Canola | nucleus | 34.11 | 33.23 |
| CDY18143 | Canola | nucleus | 33.11 | 32.68 |
| CDY20289 | Canola | nucleus | 22.52 | 32.23 |
| CDX89919 | Canola | nucleus | 33.11 | 32.15 |
| CDY46133 | Canola | nucleus | 16.56 | 26.18 |
| CDY24734 | Canola | plastid | 12.25 | 26.06 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 36.76 | 22.89 |
| Os06t0193400-01 | Rice | nucleus | 36.09 | 22.8 |
| Zm00001d016873_P001 | Maize | nucleus | 36.42 | 22.49 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 38.74 | 21.83 |
| KXG30460 | Sorghum | nucleus | 36.42 | 21.74 |
| CDY12804 | Canola | nucleus, plastid | 15.23 | 21.3 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 33.77 | 21.25 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 33.77 | 21.25 |
| TraesCS7D01G158300.1 | Wheat | nucleus | 33.77 | 21.25 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 38.08 | 21.1 |
| CDY01438 | Canola | nucleus, plastid | 15.23 | 21.1 |
| CDY65390 | Canola | nucleus | 14.57 | 21.05 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 33.44 | 21.0 |
| Zm00001d045046_P001 | Maize | nucleus | 33.44 | 21.0 |
| KXG19523 | Sorghum | nucleus | 34.11 | 20.93 |
| Os02t0564700-01 | Rice | nucleus | 34.77 | 20.04 |
| Zm00001d037098_P003 | Maize | nucleus | 33.44 | 19.39 |
| CDY35224 | Canola | nucleus | 14.9 | 17.37 |
| CDY67566 | Canola | nucleus, plastid | 15.23 | 16.79 |
| CDY00603 | Canola | nucleus, plastid | 15.23 | 16.79 |
| CDX83214 | Canola | nucleus | 18.54 | 16.09 |
| CDX91917 | Canola | nucleus | 18.21 | 15.85 |
| CDX75629 | Canola | nucleus | 17.22 | 15.03 |
| CDY44048 | Canola | nucleus, plastid | 16.89 | 14.96 |
| CDX69281 | Canola | nucleus, plastid | 17.22 | 14.9 |
| CDY22448 | Canola | nucleus, plastid | 17.22 | 14.77 |
| CDX74328 | Canola | nucleus | 18.54 | 14.47 |
| CDY21498 | Canola | nucleus | 17.88 | 13.95 |
| CDX80064 | Canola | nucleus | 16.89 | 12.75 |
| CDY06865 | Canola | nucleus | 14.9 | 12.53 |
| CDY66254 | Canola | nucleus | 16.56 | 12.5 |
| CDY14866 | Canola | nucleus | 16.56 | 12.41 |
| CDY35220 | Canola | nucleus | 15.23 | 12.4 |
| CDY31989 | Canola | nucleus | 19.54 | 12.39 |
| CDX83349 | Canola | nucleus | 16.56 | 12.38 |
| CDX70453 | Canola | nucleus | 16.56 | 12.29 |
| CDY29961 | Canola | nucleus | 16.56 | 12.29 |
| CDY50911 | Canola | nucleus | 10.93 | 12.18 |
| CDX83509 | Canola | nucleus | 16.56 | 12.11 |
| CDY30375 | Canola | nucleus | 16.23 | 12.07 |
| CDX67873 | Canola | nucleus | 12.25 | 12.05 |
| CDY05725 | Canola | nucleus | 19.87 | 11.83 |
| CDY65446 | Canola | nucleus | 12.91 | 11.78 |
| CDY06026 | Canola | nucleus | 16.89 | 11.54 |
| CDX71916 | Canola | nucleus | 16.89 | 11.51 |
| CDY42809 | Canola | nucleus | 15.56 | 11.35 |
| CDY06870 | Canola | nucleus | 16.89 | 11.21 |
| CDY22636 | Canola | nucleus | 17.22 | 10.59 |
| CDX94963 | Canola | nucleus | 17.22 | 10.44 |
| CDY06867 | Canola | nucleus | 16.56 | 10.37 |
| CDY64745 | Canola | nucleus | 17.22 | 10.36 |
| CDY11401 | Canola | extracellular | 11.92 | 10.23 |
| CDY06358 | Canola | nucleus | 16.56 | 10.18 |
| CDX76616 | Canola | extracellular | 11.92 | 10.06 |
| CDY35222 | Canola | nucleus | 15.89 | 8.32 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078J6U6 | UniProt:A0A078J6U6 | EnsemblPlants:CDY62262 | ProteinID:CDY62262 |
| ProteinID:CDY62262.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00036119001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF28 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDF36B | InterPro:bHLH_dom | SEG:seg |
Description
BnaCnng39760DBnaCnng39760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6U6]
Coordinates
chrLK034122:-:5407..6668
Molecular Weight (calculated)
31899.4 Da
IEP (calculated)
6.159
GRAVY (calculated)
-0.543
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MREREAKKED KTEEMENGNG EGKGEFINQN NSDYFLDSMS MLSSLPPCWD SSLPPPHPPP PQSLLHALTE SGGPSQDGLQ AQGTVSTTSA PVARQKPRVR
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSVSRLGGAR AAGGPGFNGL TSEAGGRLNA LSGPSNGVNG
201: KGNGTGSSSE SLRSTEQRVA KLMEEDMGSA MQYLQGKGLC LMPISLATAI SSTSNHSRGA LFNPSSNVVA AEEANVAVAS ASAAAAPEAS TCMEDDVSAS
301: KA
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSVSRLGGAR AAGGPGFNGL TSEAGGRLNA LSGPSNGVNG
201: KGNGTGSSSE SLRSTEQRVA KLMEEDMGSA MQYLQGKGLC LMPISLATAI SSTSNHSRGA LFNPSSNVVA AEEANVAVAS ASAAAAPEAS TCMEDDVSAS
301: KA
001: MENGNGEGKG EFINQNNDFF LDSMSMLSSL PPCWDPSLPP PPPPPQSLFH ALAVDAPFPD QFHHPQESGG PTMGSQEGLQ PQGTVSTTSA PVVRQKPRVR
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA
Arabidopsis Description
BHLH82LRL3 [Source:UniProtKB/TrEMBL;Acc:A0A178UI77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.