Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012133.1-P | Field mustard | nucleus, plastid | 96.76 | 97.66 |
| CDY01438 | Canola | nucleus, plastid | 96.3 | 95.41 |
| CDY37185 | Canola | mitochondrion | 38.89 | 85.71 |
| CDY24734 | Canola | plastid | 54.17 | 82.39 |
| AT5G67110.1 | Thale cress | nucleus | 73.61 | 75.71 |
| GSMUA_Achr9P11300_001 | Banana | nucleus | 19.91 | 68.25 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 24.54 | 41.09 |
| KRH04711 | Soybean | plastid | 23.61 | 31.88 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 28.7 | 31.47 |
| KRH05665 | Soybean | nucleus | 36.57 | 26.6 |
| KRH15381 | Soybean | nucleus | 36.11 | 26.26 |
| CDX75629 | Canola | nucleus | 39.81 | 24.86 |
| CDX69281 | Canola | nucleus, plastid | 38.89 | 24.07 |
| CDY22448 | Canola | nucleus, plastid | 38.43 | 23.58 |
| CDY44048 | Canola | nucleus, plastid | 37.04 | 23.46 |
| OQU75890 | Sorghum | nucleus | 31.02 | 23.02 |
| PGSC0003DMT400020534 | Potato | nucleus | 33.33 | 22.93 |
| Solyc04g078690.2.1 | Tomato | nucleus | 33.33 | 22.93 |
| VIT_18s0001g10270.t01 | Wine grape | nucleus | 38.43 | 22.49 |
| Zm00001d045212_P001 | Maize | nucleus | 33.8 | 21.53 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 32.87 | 21.45 |
| Os02t0805250-00 | Rice | nucleus | 27.78 | 21.43 |
| KXG31309 | Sorghum | nucleus | 28.7 | 21.23 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 32.87 | 21.01 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 32.87 | 20.94 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 32.41 | 20.71 |
| GSMUA_Achr10P... | Banana | plastid | 31.48 | 19.83 |
| CDY65390 | Canola | nucleus | 18.98 | 19.62 |
| CDY20289 | Canola | nucleus | 18.98 | 19.43 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 31.48 | 19.26 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 26.39 | 19.26 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 25.46 | 18.52 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 25.93 | 18.48 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 25.93 | 18.48 |
| Zm00001d018416_P001 | Maize | mitochondrion | 27.78 | 18.18 |
| CDY35224 | Canola | nucleus | 21.76 | 18.15 |
| CDY67566 | Canola | nucleus, plastid | 20.83 | 16.42 |
| CDY00603 | Canola | nucleus, plastid | 20.83 | 16.42 |
| CDY55014 | Canola | nucleus | 21.76 | 16.26 |
| CDY02785 | Canola | nucleus | 21.76 | 15.88 |
| CDY11836 | Canola | nucleus | 20.83 | 15.73 |
| CDX88653 | Canola | nucleus | 21.3 | 15.33 |
| CDY62262 | Canola | nucleus | 21.3 | 15.23 |
| CDY32733 | Canola | nucleus | 21.3 | 15.23 |
| CDY35220 | Canola | nucleus | 25.0 | 14.56 |
| CDX91917 | Canola | nucleus | 23.15 | 14.41 |
| CDY46133 | Canola | nucleus | 12.5 | 14.14 |
| CDX83214 | Canola | nucleus | 22.69 | 14.08 |
| CDY31989 | Canola | nucleus | 30.09 | 13.66 |
| CDY34780 | Canola | nucleus | 21.3 | 13.61 |
| CDX76819 | Canola | nucleus | 21.3 | 13.53 |
| CDY28232 | Canola | nucleus | 20.37 | 13.46 |
| CDX68710 | Canola | nucleus | 20.37 | 13.46 |
| CDX67873 | Canola | nucleus | 18.98 | 13.36 |
| CDX74328 | Canola | nucleus | 23.61 | 13.18 |
| CDY06865 | Canola | nucleus | 21.76 | 13.09 |
| CDY21498 | Canola | nucleus | 23.15 | 12.92 |
| CDX91293 | Canola | nucleus | 17.59 | 12.75 |
| CDX97278 | Canola | nucleus | 17.59 | 12.71 |
| CDY65446 | Canola | nucleus | 19.44 | 12.69 |
| CDY21898 | Canola | nucleus | 17.59 | 12.62 |
| CDY06870 | Canola | nucleus | 26.39 | 12.53 |
| CDY22062 | Canola | nucleus | 17.59 | 12.5 |
| CDY05725 | Canola | nucleus | 29.17 | 12.43 |
| CDY14866 | Canola | nucleus | 23.15 | 12.41 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 11.57 | 12.32 |
| CDY30375 | Canola | nucleus | 23.15 | 12.32 |
| CDY18011 | Canola | nucleus | 17.13 | 12.17 |
| CDX83509 | Canola | nucleus | 23.15 | 12.11 |
| CDY18143 | Canola | nucleus | 17.13 | 12.09 |
| CDX70453 | Canola | nucleus | 22.69 | 12.04 |
| CDY29961 | Canola | nucleus | 22.69 | 12.04 |
| CDY22636 | Canola | nucleus | 27.31 | 12.02 |
| CDY64745 | Canola | nucleus | 27.78 | 11.95 |
| CDX89919 | Canola | nucleus | 17.13 | 11.9 |
| CDX94963 | Canola | nucleus | 27.31 | 11.85 |
| CDX90930 | Canola | nucleus | 16.67 | 11.61 |
| CDY06358 | Canola | nucleus | 25.93 | 11.41 |
| CDY42809 | Canola | nucleus | 21.76 | 11.35 |
| CDX80064 | Canola | nucleus | 20.83 | 11.25 |
| CDY66254 | Canola | nucleus | 20.83 | 11.25 |
| CDY06867 | Canola | nucleus | 25.0 | 11.2 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 31.02 | 11.19 |
| CDY06026 | Canola | nucleus | 22.69 | 11.09 |
| CDX71916 | Canola | nucleus | 22.69 | 11.06 |
| CDX83349 | Canola | nucleus | 20.37 | 10.89 |
| CDY50911 | Canola | nucleus | 12.5 | 9.96 |
| CDY35222 | Canola | nucleus | 25.46 | 9.53 |
| CDX76616 | Canola | extracellular | 15.74 | 9.5 |
| CDY11401 | Canola | extracellular | 15.28 | 9.38 |
| CDY46132 | Canola | endoplasmic reticulum | 6.94 | 8.52 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078FIJ1 | UniProt:A0A078FIJ1 | EnsemblPlants:CDY12804 | ProteinID:CDY12804 |
| ProteinID:CDY12804.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00070429001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF297 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE7345 | InterPro:bHLH_dom | SEG:seg |
Description
BnaC07g16290DBnaC07g16290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIJ1]
Coordinates
chrLK032027:-:240864..241963
Molecular Weight (calculated)
23512.2 Da
IEP (calculated)
9.261
GRAVY (calculated)
-0.490
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSDEGDRL PAPSSSDELS SILRQVLSRT PTAQPSFSPK KIVSSAEMFN RTFPLVPGGA VSYAACAVAE TGEGKCGFEN KRNGARQRNS LKRNIDAQFH
101: TLSEKRRRSK INEKMKALQK LIPNSNKVTD KASMLDEAIE YLKQLQLQFQ TLAAMNGLGL NPLRLPPILP PTQTGITGTS EQGLNLETLL GGSHSMANLE
201: PPEPTQEMCF PTTTLL
101: TLSEKRRRSK INEKMKALQK LIPNSNKVTD KASMLDEAIE YLKQLQLQFQ TLAAMNGLGL NPLRLPPILP PTQTGITGTS EQGLNLETLL GGSHSMANLE
201: PPEPTQEMCF PTTTLL
001: MGDSDVGDRL PPPSSSDELS SFLRQILSRT PTAQPSSPPK STNVSSAETF FPSVSGGAVS SVGYGVSETG QDKYAFEHKR SGAKQRNSLK RNIDAQFHNL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
Arabidopsis Description
ALCTranscription factor ALC [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.