Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P11300_001 | Banana | nucleus | 25.35 | 57.14 |
| CDY12804 | Canola | nucleus, plastid | 82.39 | 54.17 |
| Bra012133.1-P | Field mustard | nucleus, plastid | 80.99 | 53.74 |
| CDY01438 | Canola | nucleus, plastid | 80.99 | 52.75 |
| CDY37185 | Canola | mitochondrion | 31.69 | 45.92 |
| AT5G67110.1 | Thale cress | nucleus | 67.61 | 45.71 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 28.17 | 31.01 |
| KRH04711 | Soybean | plastid | 28.17 | 25.0 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 34.51 | 24.87 |
| KRH05665 | Soybean | nucleus | 37.32 | 17.85 |
| KRH15381 | Soybean | nucleus | 36.62 | 17.51 |
| Solyc04g078690.2.1 | Tomato | nucleus | 38.03 | 17.2 |
| PGSC0003DMT400020534 | Potato | nucleus | 38.03 | 17.2 |
| CDX75629 | Canola | nucleus | 40.85 | 16.76 |
| CDY65390 | Canola | nucleus | 24.65 | 16.75 |
| CDY44048 | Canola | nucleus, plastid | 39.44 | 16.42 |
| CDX69281 | Canola | nucleus, plastid | 40.14 | 16.33 |
| CDY22448 | Canola | nucleus, plastid | 40.14 | 16.19 |
| CDY20289 | Canola | nucleus | 23.94 | 16.11 |
| OQU75890 | Sorghum | nucleus | 32.39 | 15.81 |
| VIT_18s0001g10270.t01 | Wine grape | nucleus | 40.14 | 15.45 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 34.51 | 14.8 |
| Os02t0805250-00 | Rice | nucleus | 28.87 | 14.64 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 34.51 | 14.5 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 34.51 | 14.45 |
| Zm00001d045212_P001 | Maize | nucleus | 34.51 | 14.45 |
| KXG31309 | Sorghum | nucleus | 29.58 | 14.38 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 33.8 | 14.2 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 27.46 | 13.18 |
| GSMUA_Achr10P... | Banana | plastid | 31.69 | 13.12 |
| CDY11836 | Canola | nucleus | 26.06 | 12.94 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 27.46 | 12.87 |
| CDY55014 | Canola | nucleus | 26.06 | 12.8 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 26.76 | 12.79 |
| CDX88653 | Canola | nucleus | 26.76 | 12.67 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 26.76 | 12.54 |
| CDY02785 | Canola | nucleus | 26.06 | 12.5 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 30.99 | 12.46 |
| Zm00001d018416_P001 | Maize | mitochondrion | 28.87 | 12.42 |
| CDY35224 | Canola | nucleus | 22.54 | 12.36 |
| CDY62262 | Canola | nucleus | 26.06 | 12.25 |
| CDY35220 | Canola | nucleus | 31.69 | 12.13 |
| CDY32733 | Canola | nucleus | 25.35 | 11.92 |
| CDY67566 | Canola | nucleus, plastid | 21.83 | 11.31 |
| CDY00603 | Canola | nucleus, plastid | 21.83 | 11.31 |
| CDX68710 | Canola | nucleus | 25.35 | 11.01 |
| CDY28232 | Canola | nucleus | 25.35 | 11.01 |
| CDX91917 | Canola | nucleus | 26.06 | 10.66 |
| CDY34780 | Canola | nucleus | 25.35 | 10.65 |
| CDX76819 | Canola | nucleus | 25.35 | 10.59 |
| CDY46133 | Canola | nucleus | 14.08 | 10.47 |
| CDX83214 | Canola | nucleus | 25.35 | 10.34 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 14.79 | 10.34 |
| CDY31989 | Canola | nucleus | 33.8 | 10.08 |
| CDX91293 | Canola | nucleus | 21.13 | 10.07 |
| CDY21898 | Canola | nucleus | 21.13 | 9.97 |
| CDY18011 | Canola | nucleus | 21.13 | 9.87 |
| CDY22062 | Canola | nucleus | 21.13 | 9.87 |
| CDX74328 | Canola | nucleus | 26.76 | 9.82 |
| CDY18143 | Canola | nucleus | 21.13 | 9.8 |
| CDX97278 | Canola | nucleus | 20.42 | 9.7 |
| CDX90930 | Canola | nucleus | 21.13 | 9.68 |
| CDX89919 | Canola | nucleus | 21.13 | 9.65 |
| CDY21498 | Canola | nucleus | 26.06 | 9.56 |
| CDY06865 | Canola | nucleus | 23.94 | 9.47 |
| CDY05725 | Canola | nucleus | 33.8 | 9.47 |
| CDY06870 | Canola | nucleus | 30.28 | 9.45 |
| CDY30375 | Canola | nucleus | 25.35 | 8.87 |
| CDX67873 | Canola | nucleus | 19.01 | 8.79 |
| CDY64745 | Canola | nucleus | 30.99 | 8.76 |
| CDY22636 | Canola | nucleus | 30.28 | 8.76 |
| CDX83509 | Canola | nucleus | 25.35 | 8.72 |
| CDY14866 | Canola | nucleus | 24.65 | 8.68 |
| CDX94963 | Canola | nucleus | 30.28 | 8.63 |
| CDX70453 | Canola | nucleus | 24.65 | 8.6 |
| CDY29961 | Canola | nucleus | 24.65 | 8.6 |
| CDY06867 | Canola | nucleus | 28.87 | 8.51 |
| CDY65446 | Canola | nucleus | 19.72 | 8.46 |
| CDY06358 | Canola | nucleus | 28.87 | 8.35 |
| CDY42809 | Canola | nucleus | 23.94 | 8.21 |
| CDY06026 | Canola | nucleus | 23.94 | 7.69 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 32.39 | 7.68 |
| CDX71916 | Canola | nucleus | 23.94 | 7.67 |
| CDX80064 | Canola | nucleus | 21.13 | 7.5 |
| CDY35222 | Canola | nucleus | 30.28 | 7.45 |
| CDX83349 | Canola | nucleus | 21.13 | 7.43 |
| CDY66254 | Canola | nucleus | 19.72 | 7.0 |
| CDY46132 | Canola | endoplasmic reticulum | 8.45 | 6.82 |
| CDY50911 | Canola | nucleus | 12.68 | 6.64 |
| CDY11401 | Canola | extracellular | 16.2 | 6.53 |
| CDX76616 | Canola | extracellular | 16.2 | 6.42 |
Protein Annotations
| EnsemblPlants:CDY24734 | EnsemblPlantsGene:GSBRNA2T00027134001 | Gene3D:4.10.280.10 | GO:A0A078GHF1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF297 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDY24734 | ProteinID:CDY24734.1 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEDB71 | UniProt:A0A078GHF1 | MapMan:15.5.32 | : |
Description
BnaC04g13390DBnaC04g13390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHF1]
Coordinates
chrLK032163:-:167986..168722
Molecular Weight (calculated)
15668.5 Da
IEP (calculated)
8.222
GRAVY (calculated)
-0.507
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSDARDRL PAPSSSDELS SILRQVLSRT PPTAQPSFSR KKIVSSGEMF NRTFPLVHGG AVSYAACAVS ETEEGKCAFE NQLIETESIA DRRSKINEKI
101: KALQKLIPNS NKTDKASMFD ETIEYLKQLQ LQFSTLGFGQ AH
101: KALQKLIPNS NKTDKASMFD ETIEYLKQLQ LQFSTLGFGQ AH
001: MGDSDVGDRL PPPSSSDELS SFLRQILSRT PTAQPSSPPK STNVSSAETF FPSVSGGAVS SVGYGVSETG QDKYAFEHKR SGAKQRNSLK RNIDAQFHNL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
Arabidopsis Description
ALCTranscription factor ALC [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.