Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46132 | Canola | endoplasmic reticulum | 77.83 | 89.77 |
| KRH71344 | Soybean | cytosol | 15.76 | 42.67 |
| CDX76819 | Canola | nucleus | 67.0 | 40.0 |
| CDY34780 | Canola | nucleus | 66.5 | 39.94 |
| Os02t0795800-00 | Rice | endoplasmic reticulum, mitochondrion, nucleus, plastid | 45.81 | 33.21 |
| CDY28232 | Canola | nucleus | 50.74 | 31.5 |
| CDX68710 | Canola | nucleus | 50.25 | 31.19 |
| CDY55014 | Canola | nucleus | 44.34 | 31.14 |
| CDY02785 | Canola | nucleus | 43.84 | 30.07 |
| CDY62262 | Canola | nucleus | 43.84 | 29.47 |
| CDY11836 | Canola | nucleus | 41.38 | 29.37 |
| CDY32733 | Canola | nucleus | 43.35 | 29.14 |
| CDX88653 | Canola | nucleus | 42.36 | 28.67 |
| Zm00001d020490_P001 | Maize | nucleus | 45.81 | 27.03 |
| Zm00001d052038_P001 | Maize | nucleus | 43.35 | 26.35 |
| Zm00001d045107_P001 | Maize | nucleus | 42.86 | 26.2 |
| TraesCS6D01G341200.1 | Wheat | nucleus | 45.81 | 25.98 |
| TraesCS6B01G391100.1 | Wheat | nucleus | 45.81 | 25.91 |
| HORVU6Hr1G085500.3 | Barley | nucleus | 45.32 | 25.41 |
| TraesCS7D01G149400.1 | Wheat | nucleus | 48.28 | 24.5 |
| CDY37185 | Canola | mitochondrion | 11.82 | 24.49 |
| TraesCS7A01G147500.1 | Wheat | nucleus | 47.78 | 24.37 |
| TraesCS6A01G358400.3 | Wheat | nucleus | 46.31 | 24.23 |
| Zm00001d018374_P001 | Maize | nucleus | 46.31 | 24.16 |
| EES05953 | Sorghum | nucleus | 46.31 | 23.92 |
| TraesCS5A01G225700.1 | Wheat | nucleus | 53.69 | 23.8 |
| TraesCS5B01G224200.1 | Wheat | nucleus | 53.69 | 23.44 |
| TraesCS5D01G233000.1 | Wheat | nucleus | 53.2 | 23.08 |
| CDY21898 | Canola | nucleus | 33.5 | 22.59 |
| CDX91293 | Canola | nucleus | 33.0 | 22.48 |
| Os06t0184000-00 | Rice | nucleus | 43.35 | 22.11 |
| CDY18011 | Canola | nucleus | 33.0 | 22.04 |
| CDY22062 | Canola | nucleus | 33.0 | 22.04 |
| GSMUA_Achr10P... | Banana | nucleus | 43.35 | 22.0 |
| CDX90930 | Canola | nucleus | 33.0 | 21.61 |
| OQU89497 | Sorghum | nucleus | 49.26 | 21.51 |
| CDX97278 | Canola | nucleus | 31.53 | 21.4 |
| GSMUA_Achr10P... | Banana | nucleus | 45.81 | 21.14 |
| CDY18143 | Canola | nucleus | 31.53 | 20.91 |
| EER89334 | Sorghum | nucleus | 45.81 | 20.81 |
| CDX89919 | Canola | nucleus | 31.53 | 20.58 |
| GSMUA_Achr5P16470_001 | Banana | nucleus | 45.81 | 20.44 |
| CDY20289 | Canola | nucleus | 18.23 | 17.54 |
| HORVU7Hr1G030250.5 | Barley | nucleus | 30.54 | 15.7 |
| CDY24734 | Canola | plastid | 10.34 | 14.79 |
| CDY65390 | Canola | nucleus | 14.78 | 14.35 |
| KRH71345 | Soybean | nucleus | 11.33 | 12.99 |
| CDY12804 | Canola | nucleus, plastid | 12.32 | 11.57 |
| CDY01438 | Canola | nucleus, plastid | 12.32 | 11.47 |
| CDY35224 | Canola | nucleus | 13.79 | 10.81 |
| HORVU5Hr1G065450.20 | Barley | nucleus | 24.14 | 10.52 |
| CDY00603 | Canola | nucleus, plastid | 11.82 | 8.76 |
| CDY67566 | Canola | nucleus, plastid | 11.82 | 8.76 |
| CDX67873 | Canola | nucleus | 12.81 | 8.47 |
| CDY22448 | Canola | nucleus, plastid | 14.29 | 8.24 |
| CDY44048 | Canola | nucleus, plastid | 13.79 | 8.21 |
| CDX83214 | Canola | nucleus | 13.79 | 8.05 |
| CDX69281 | Canola | nucleus, plastid | 13.79 | 8.02 |
| CDX75629 | Canola | nucleus | 13.3 | 7.8 |
| CDX91917 | Canola | nucleus | 13.3 | 7.78 |
| CDY65446 | Canola | nucleus | 12.32 | 7.55 |
| CDX83349 | Canola | nucleus | 14.78 | 7.43 |
| CDY06358 | Canola | nucleus | 17.73 | 7.33 |
| CDX74328 | Canola | nucleus | 13.79 | 7.24 |
| CDY22636 | Canola | nucleus | 17.24 | 7.13 |
| CDY11401 | Canola | extracellular | 12.32 | 7.1 |
| CDX80064 | Canola | nucleus | 13.79 | 7.0 |
| CDX76616 | Canola | extracellular | 12.32 | 6.98 |
| CDY31989 | Canola | nucleus | 16.26 | 6.93 |
| CDX94963 | Canola | nucleus | 16.75 | 6.83 |
| CDX83509 | Canola | nucleus | 13.79 | 6.78 |
| CDY64745 | Canola | nucleus | 16.75 | 6.77 |
| CDY66254 | Canola | nucleus | 13.3 | 6.75 |
| CDY21498 | Canola | nucleus | 12.81 | 6.72 |
| CDY42809 | Canola | nucleus | 13.3 | 6.52 |
| CDY05725 | Canola | nucleus | 16.26 | 6.51 |
| CDY14866 | Canola | nucleus | 12.81 | 6.45 |
| CDX70453 | Canola | nucleus | 12.81 | 6.39 |
| CDY29961 | Canola | nucleus | 12.81 | 6.39 |
| CDY06870 | Canola | nucleus | 14.29 | 6.37 |
| CDY50911 | Canola | nucleus | 8.37 | 6.27 |
| CDY30375 | Canola | nucleus | 12.32 | 6.16 |
| CDY06865 | Canola | nucleus | 10.34 | 5.85 |
| CDY06026 | Canola | nucleus | 12.32 | 5.66 |
| CDX71916 | Canola | nucleus | 12.32 | 5.64 |
| CDY46133 | Canola | nucleus | 4.93 | 5.24 |
| CDY06867 | Canola | nucleus | 12.32 | 5.19 |
| CDY35220 | Canola | nucleus | 9.36 | 5.12 |
| CDY35222 | Canola | nucleus | 11.82 | 4.16 |
Protein Annotations
| EnsemblPlants:CDY20290 | EnsemblPlantsGene:GSBRNA2T00012207001 | GO:A0A078G157 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR036638 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 | ProteinID:CDY20290 |
| ProteinID:CDY20290.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47459 | UniParc:UPI0004EE16BE | UniProt:A0A078G157 |
| MapMan:15.5.32 | : | : | : | : | : |
Description
BnaC04g36660DBnaC04g36660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G157]
Coordinates
chrLK032105:-:307142..309244
Molecular Weight (calculated)
21318.5 Da
IEP (calculated)
6.751
GRAVY (calculated)
-0.011
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFLSFSCTL FSFNMKGILT DCFLCIYINN NWQTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAYVSS QSSEAGGSHG SASSAVAGGN QPTGNSNDGL
101: TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATSHTRNSLI PGAGDVGGRP SSSNLSGKTV QTMNTLKLNS NGNCMAEGSS SIAVKEAVSI
201: SKP
101: TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATSHTRNSLI PGAGDVGGRP SSSNLSGKTV QTMNTLKLNS NGNCMAEGSS SIAVKEAVSI
201: SKP
001: MNQQGQTQTQ TQPQASASTA TGGTVAAPPQ SRTKIRARRG QATDPHSIAE RLRRERIAER MKALQELVPN GNKTDKASML DEIIDYVKFL QLQVKVLSMS
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.