Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 89.77 | 77.83 |
| KRH71344 | Soybean | cytosol | 17.61 | 41.33 |
| CDX76819 | Canola | nucleus | 70.45 | 36.47 |
| CDY34780 | Canola | nucleus | 69.89 | 36.39 |
| Os02t0795800-00 | Rice | endoplasmic reticulum, mitochondrion, nucleus, plastid | 46.02 | 28.93 |
| CDY55014 | Canola | nucleus | 44.32 | 26.99 |
| CDX68710 | Canola | nucleus | 50.0 | 26.91 |
| CDY28232 | Canola | nucleus | 50.0 | 26.91 |
| CDY02785 | Canola | nucleus | 43.75 | 26.01 |
| CDY11836 | Canola | nucleus | 41.48 | 25.52 |
| CDY62262 | Canola | nucleus | 43.75 | 25.5 |
| CDY32733 | Canola | nucleus | 43.18 | 25.17 |
| CDX88653 | Canola | nucleus | 42.61 | 25.0 |
| Zm00001d052038_P001 | Maize | nucleus | 44.32 | 23.35 |
| Zm00001d020490_P001 | Maize | nucleus | 44.32 | 22.67 |
| Zm00001d045107_P001 | Maize | nucleus | 42.61 | 22.59 |
| TraesCS6D01G341200.1 | Wheat | nucleus | 45.45 | 22.35 |
| TraesCS6B01G391100.1 | Wheat | nucleus | 45.45 | 22.28 |
| HORVU6Hr1G085500.3 | Barley | nucleus | 44.89 | 21.82 |
| Zm00001d018374_P001 | Maize | nucleus | 46.59 | 21.08 |
| EES05953 | Sorghum | nucleus | 46.59 | 20.87 |
| TraesCS7D01G149400.1 | Wheat | nucleus | 47.16 | 20.75 |
| TraesCS6A01G358400.3 | Wheat | nucleus | 45.45 | 20.62 |
| TraesCS7A01G147500.1 | Wheat | nucleus | 46.59 | 20.6 |
| CDX91293 | Canola | nucleus | 34.09 | 20.13 |
| TraesCS5B01G224200.1 | Wheat | nucleus | 52.84 | 20.0 |
| CDY21898 | Canola | nucleus | 34.09 | 19.93 |
| TraesCS5A01G225700.1 | Wheat | nucleus | 51.7 | 19.87 |
| CDY22062 | Canola | nucleus | 34.09 | 19.74 |
| TraesCS5D01G233000.1 | Wheat | nucleus | 52.27 | 19.66 |
| CDY18011 | Canola | nucleus | 33.52 | 19.41 |
| GSMUA_Achr10P... | Banana | nucleus | 43.75 | 19.25 |
| CDX97278 | Canola | nucleus | 32.39 | 19.06 |
| CDX90930 | Canola | nucleus | 33.52 | 19.03 |
| GSMUA_Achr10P... | Banana | nucleus | 47.16 | 18.86 |
| CDY18143 | Canola | nucleus | 32.39 | 18.63 |
| Os06t0184000-00 | Rice | nucleus | 42.05 | 18.59 |
| CDX89919 | Canola | nucleus | 32.39 | 18.33 |
| OQU89497 | Sorghum | nucleus | 47.16 | 17.85 |
| GSMUA_Achr5P16470_001 | Banana | nucleus | 46.02 | 17.8 |
| EER89334 | Sorghum | nucleus | 44.32 | 17.45 |
| CDY37185 | Canola | mitochondrion | 7.95 | 14.29 |
| HORVU7Hr1G030250.5 | Barley | nucleus | 27.84 | 12.41 |
| CDY20289 | Canola | nucleus | 13.07 | 10.9 |
| CDY65390 | Canola | nucleus | 12.5 | 10.53 |
| KRH71345 | Soybean | nucleus | 9.09 | 9.04 |
| CDY24734 | Canola | plastid | 6.82 | 8.45 |
| CDY35224 | Canola | nucleus | 11.36 | 7.72 |
| HORVU5Hr1G065450.20 | Barley | nucleus | 19.89 | 7.51 |
| CDX67873 | Canola | nucleus | 13.07 | 7.49 |
| CDY12804 | Canola | nucleus, plastid | 8.52 | 6.94 |
| CDY01438 | Canola | nucleus, plastid | 8.52 | 6.88 |
| CDY65446 | Canola | nucleus | 12.5 | 6.65 |
| CDY11401 | Canola | extracellular | 12.5 | 6.25 |
| CDY00603 | Canola | nucleus, plastid | 9.66 | 6.2 |
| CDY67566 | Canola | nucleus, plastid | 9.66 | 6.2 |
| CDX76616 | Canola | extracellular | 12.5 | 6.15 |
| CDY22448 | Canola | nucleus, plastid | 11.93 | 5.97 |
| CDY44048 | Canola | nucleus, plastid | 11.36 | 5.87 |
| CDX83214 | Canola | nucleus | 11.36 | 5.75 |
| CDX83349 | Canola | nucleus | 13.07 | 5.69 |
| CDX80064 | Canola | nucleus | 12.5 | 5.5 |
| CDX91917 | Canola | nucleus | 10.8 | 5.48 |
| CDX69281 | Canola | nucleus, plastid | 10.8 | 5.44 |
| CDY06358 | Canola | nucleus | 14.77 | 5.3 |
| CDY66254 | Canola | nucleus | 11.93 | 5.25 |
| CDX75629 | Canola | nucleus | 10.23 | 5.2 |
| CDX74328 | Canola | nucleus | 11.36 | 5.17 |
| CDY22636 | Canola | nucleus | 14.2 | 5.09 |
| CDX94963 | Canola | nucleus | 13.64 | 4.82 |
| CDY64745 | Canola | nucleus | 13.64 | 4.78 |
| CDY21498 | Canola | nucleus | 10.23 | 4.65 |
| CDY31989 | Canola | nucleus | 12.5 | 4.62 |
| CDX83509 | Canola | nucleus | 10.8 | 4.6 |
| CDY42809 | Canola | nucleus | 10.8 | 4.59 |
| CDY14866 | Canola | nucleus | 10.23 | 4.47 |
| CDY29961 | Canola | nucleus | 10.23 | 4.42 |
| CDX70453 | Canola | nucleus | 10.23 | 4.42 |
| CDY05725 | Canola | nucleus | 12.5 | 4.34 |
| CDY06026 | Canola | nucleus | 10.8 | 4.3 |
| CDX71916 | Canola | nucleus | 10.8 | 4.29 |
| CDY30375 | Canola | nucleus | 9.66 | 4.19 |
| CDY06870 | Canola | nucleus | 10.8 | 4.18 |
| CDY50911 | Canola | nucleus | 6.25 | 4.06 |
| CDY06865 | Canola | nucleus | 6.82 | 3.34 |
| CDY06867 | Canola | nucleus | 9.09 | 3.32 |
| CDY35220 | Canola | nucleus | 5.68 | 2.7 |
| CDY35222 | Canola | nucleus | 8.52 | 2.6 |
| CDY46133 | Canola | nucleus | 1.14 | 1.05 |
Protein Annotations
| EnsemblPlants:CDY46132 | EnsemblPlantsGene:GSBRNA2T00083301001 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 | ProteinID:CDY46132 | ProteinID:CDY46132.1 |
| SEG:seg | UniParc:UPI0004EE3236 | UniProt:A0A078I7S2 | MapMan:15.5.32 | : | : |
Description
BnaA04g14200DBnaA04g14200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7S2]
Coordinates
chrLK032651:-:29246..31198
Molecular Weight (calculated)
18230.8 Da
IEP (calculated)
5.609
GRAVY (calculated)
-0.022
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDEIIDYVK FLQLQVKFVI YTSCLMYTVL SMSRLGGAAY VSSQISEAGG SHESASSAVA GGNQPTGNSN DGLTMTEHQV AKLMEEDMGS AMQYLQGKGL
101: CLMPISLATA ISTATSHTRN SLIPGAADVG GSPSSSNLSG KTVQTMNTLK LNSNGNGMPE GSSSIAVKEA VTISKP
101: CLMPISLATA ISTATSHTRN SLIPGAADVG GSPSSSNLSG KTVQTMNTLK LNSNGNGMPE GSSSIAVKEA VTISKP
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.