Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002679.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY62262 | Canola | nucleus | 96.54 | 92.38 |
| CDY02785 | Canola | nucleus | 86.16 | 84.12 |
| CDY11836 | Canola | nucleus | 82.01 | 82.87 |
| CDY32733 | Canola | nucleus | 86.51 | 82.78 |
| CDX88653 | Canola | nucleus | 84.78 | 81.67 |
| AT5G58010.1 | Thale cress | nucleus | 83.05 | 80.81 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 31.14 | 44.34 |
| CDY46132 | Canola | endoplasmic reticulum | 26.99 | 44.32 |
| CDY37185 | Canola | mitochondrion | 13.49 | 39.8 |
| CDX68710 | Canola | nucleus | 44.98 | 39.76 |
| CDY28232 | Canola | nucleus | 44.64 | 39.45 |
| CDX76819 | Canola | nucleus | 44.64 | 37.94 |
| CDY34780 | Canola | nucleus | 43.94 | 37.57 |
| CDX91293 | Canola | nucleus | 37.37 | 36.24 |
| CDY21898 | Canola | nucleus | 36.68 | 35.22 |
| CDY18011 | Canola | nucleus | 36.68 | 34.87 |
| CDY22062 | Canola | nucleus | 36.68 | 34.87 |
| CDX97278 | Canola | nucleus | 35.99 | 34.78 |
| CDX90930 | Canola | nucleus | 36.33 | 33.87 |
| CDY18143 | Canola | nucleus | 34.95 | 33.01 |
| CDX89919 | Canola | nucleus | 34.95 | 32.48 |
| CDY20289 | Canola | nucleus | 23.53 | 32.23 |
| CDY46133 | Canola | nucleus | 17.3 | 26.18 |
| CDY24734 | Canola | plastid | 12.8 | 26.06 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 38.41 | 22.89 |
| Os06t0193400-01 | Rice | nucleus | 37.72 | 22.8 |
| Zm00001d016873_P001 | Maize | nucleus | 38.06 | 22.49 |
| CDY12804 | Canola | nucleus, plastid | 16.26 | 21.76 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 40.14 | 21.64 |
| CDY01438 | Canola | nucleus, plastid | 16.26 | 21.56 |
| TraesCS7D01G158300.1 | Wheat | nucleus | 35.64 | 21.46 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 35.64 | 21.46 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 35.64 | 21.46 |
| KXG30460 | Sorghum | nucleus | 37.37 | 21.34 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 35.29 | 21.21 |
| Zm00001d045046_P001 | Maize | nucleus | 35.29 | 21.21 |
| KXG19523 | Sorghum | nucleus | 35.99 | 21.14 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 39.79 | 21.1 |
| CDY65390 | Canola | nucleus | 15.22 | 21.05 |
| Os02t0564700-01 | Rice | nucleus | 36.33 | 20.04 |
| Zm00001d037098_P003 | Maize | nucleus | 35.64 | 19.77 |
| CDY35224 | Canola | nucleus | 15.57 | 17.37 |
| CDY67566 | Canola | nucleus, plastid | 15.57 | 16.42 |
| CDY00603 | Canola | nucleus, plastid | 15.57 | 16.42 |
| CDX83214 | Canola | nucleus | 19.38 | 16.09 |
| CDX91917 | Canola | nucleus | 19.03 | 15.85 |
| CDX75629 | Canola | nucleus | 18.69 | 15.61 |
| CDY44048 | Canola | nucleus, plastid | 17.99 | 15.25 |
| CDX69281 | Canola | nucleus, plastid | 18.34 | 15.19 |
| CDY22448 | Canola | nucleus, plastid | 18.34 | 15.06 |
| CDX74328 | Canola | nucleus | 19.38 | 14.47 |
| CDY21498 | Canola | nucleus | 18.69 | 13.95 |
| CDX80064 | Canola | nucleus | 17.99 | 13.0 |
| CDY66254 | Canola | nucleus | 17.65 | 12.75 |
| CDY06865 | Canola | nucleus | 15.57 | 12.53 |
| CDY35220 | Canola | nucleus | 15.92 | 12.4 |
| CDY31989 | Canola | nucleus | 20.42 | 12.39 |
| CDX83349 | Canola | nucleus | 17.3 | 12.38 |
| CDY50911 | Canola | nucleus | 11.42 | 12.18 |
| CDY14866 | Canola | nucleus | 16.95 | 12.16 |
| CDX67873 | Canola | nucleus | 12.8 | 12.05 |
| CDX70453 | Canola | nucleus | 16.95 | 12.04 |
| CDY29961 | Canola | nucleus | 16.95 | 12.04 |
| CDX83509 | Canola | nucleus | 16.95 | 11.86 |
| CDY05725 | Canola | nucleus | 20.76 | 11.83 |
| CDY30375 | Canola | nucleus | 16.61 | 11.82 |
| CDY65446 | Canola | nucleus | 13.49 | 11.78 |
| CDY06870 | Canola | nucleus | 17.99 | 11.43 |
| CDY06026 | Canola | nucleus | 17.3 | 11.31 |
| CDX71916 | Canola | nucleus | 17.3 | 11.29 |
| CDY42809 | Canola | nucleus | 15.92 | 11.11 |
| CDY22636 | Canola | nucleus | 17.99 | 10.59 |
| CDX94963 | Canola | nucleus | 17.99 | 10.44 |
| CDY06867 | Canola | nucleus | 17.3 | 10.37 |
| CDY64745 | Canola | nucleus | 17.99 | 10.36 |
| CDY11401 | Canola | extracellular | 12.46 | 10.23 |
| CDY06358 | Canola | nucleus | 17.3 | 10.18 |
| CDX76616 | Canola | extracellular | 12.46 | 10.06 |
| CDY35222 | Canola | nucleus | 16.61 | 8.32 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078J065 | UniProt:A0A078J065 | EnsemblPlants:CDY55014 | ProteinID:CDY55014 |
| ProteinID:CDY55014.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00014981001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF28 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002545175 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA10g29390DBnaA10g29390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J065]
Coordinates
chrLK033370:-:56310..57528
Molecular Weight (calculated)
30290.6 Da
IEP (calculated)
6.140
GRAVY (calculated)
-0.436
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGNGEGKG EFINQNNSDY FLDSMSMLSS LPPCWDSSLP PPHPPPPQSL LHALTESGGP SQDGLQAQGT VSTTSAPVAC QKPRVRARRG QATDPHSIAE
101: RLRRERIAER MKSLQELVPN TNKTDKASML DEIIEYVRFL QLQVKVLSVS RLGGARAAGG PGFNGLTSEV GGRLNPLSGP SNGLNGKGNG TGSSNESLRS
201: TEQRVAKLME EDMGSAMQYL QGKGLCLMPI SLATAISSTS NHSRGALFNP ISNIVAAEEA NVANASASAA AAAPEASTSM EDDVSASKA
101: RLRRERIAER MKSLQELVPN TNKTDKASML DEIIEYVRFL QLQVKVLSVS RLGGARAAGG PGFNGLTSEV GGRLNPLSGP SNGLNGKGNG TGSSNESLRS
201: TEQRVAKLME EDMGSAMQYL QGKGLCLMPI SLATAISSTS NHSRGALFNP ISNIVAAEEA NVANASASAA AAAPEASTSM EDDVSASKA
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.