Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G158300.1 | Wheat | nucleus | 73.22 | 72.92 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 72.8 | 72.5 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 71.76 | 71.46 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 71.76 | 71.31 |
| KXG19523 | Sorghum | nucleus | 67.78 | 65.85 |
| Zm00001d045046_P001 | Maize | nucleus | 66.11 | 65.7 |
| Zm00001d037098_P003 | Maize | nucleus | 65.48 | 60.08 |
| Os07t0182200-01 | Rice | cytosol | 13.6 | 47.79 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 44.56 | 43.92 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 47.49 | 41.65 |
| Bra020398.1-P | Field mustard | nucleus | 22.59 | 38.57 |
| CDY11836 | Canola | nucleus | 22.8 | 38.11 |
| Bra002679.1-P | Field mustard | nucleus | 22.8 | 37.72 |
| CDY55014 | Canola | nucleus | 22.8 | 37.72 |
| AT5G58010.1 | Thale cress | nucleus | 22.8 | 36.7 |
| Bra006788.1-P | Field mustard | nucleus | 23.01 | 36.67 |
| CDX88653 | Canola | nucleus | 23.01 | 36.67 |
| CDY02785 | Canola | nucleus | 22.59 | 36.49 |
| CDY62262 | Canola | nucleus | 22.8 | 36.09 |
| CDY32733 | Canola | nucleus | 22.59 | 35.76 |
| Os03t0797600-01 | Rice | nucleus | 21.34 | 34.69 |
| Os02t0564700-01 | Rice | nucleus | 36.19 | 33.02 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 34.52 | 30.78 |
| Os06t0184000-00 | Rice | nucleus | 24.69 | 29.65 |
| Os02t0795800-00 | Rice | endoplasmic reticulum, mitochondrion, nucleus, plastid | 16.53 | 28.21 |
| Os04t0618600-01 | Rice | nucleus | 7.74 | 20.44 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 8.16 | 19.8 |
| Os02t0805250-00 | Rice | nucleus | 9.41 | 16.07 |
| Os12t0610200-01 | Rice | nucleus | 11.72 | 12.58 |
| Os03t0782500-01 | Rice | nucleus | 10.67 | 12.44 |
| Os05t0139100-01 | Rice | nucleus | 12.13 | 11.49 |
| Os10t0556200-01 | Rice | nucleus | 11.09 | 11.4 |
| Os07t0143200-01 | Rice | nucleus | 9.62 | 11.11 |
| Os01t0286100-01 | Rice | nucleus | 11.51 | 8.63 |
| Os03t0639300-01 | Rice | nucleus | 3.14 | 4.89 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:4340382 | EMBL:AK065667 | ProteinID:BAD35275.1 | ProteinID:BAF18957.1 |
| ProteinID:BAS96596.1 | ProteinID:EAZ36119.1 | GO:GO:0001046 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlantsGene:Os06g0193400 | EnsemblPlants:Os06t0193400-01 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF62 | UniProt:Q69Y52 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000040373A | RefSeq:XP_015644031.1 |
| RefSeq:XP_015644033.1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
PI STARVATION-INDUCED TRANSCRIPTION FACTOR-1Similar to Helix-loop-helix protein homolog. (Os06t0193400-01);Similar to BHLH transcription factor. (Os06t0193400-02)
Coordinates
chr6:-:4709766..4715552
Molecular Weight (calculated)
50728.6 Da
IEP (calculated)
5.003
GRAVY (calculated)
-0.339
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSAGSYMW PGNSGSENYN FVDGSSESYA EEGSLPPSGY FMGAGSDRSL KITENERNPT MLANGCLPYN TQAHPLSGQI LPKGELPNNL LDLQQLQNSS
101: NLRSNSIPPG VLQCNSTSGT FDAKLDTPGL AELPHALSSS IDSNGSDISA FLADVHAVSS APTLCSAFQN VSSFMEPVNL DAFGFQGAQN VAMLNKTSLP
201: NGNPSLFDNA AIASLHDSKE FLNGGSIPSF GTVLQALGAG GLKAAQQEQN IRNIPLPTFT SGSHLAVTDA QGPPLPSKIP PLIHDHNSEY PINHSSDVEP
301: QANSAPGNSA NAKPRTRARR GQATDPHSIA ERLRREKISE RMKNLQVLVP NSNKADKASM LDEIIDYVKF LQLQVKVLSM SRLGAPGAVL PLLRESQTEC
401: HSNPSLSAST ISQGPPDMPD SEDSSAFEQE VVKLMETSII SAMQYLQNKG LCLMPIALAS AISNQKGMAA AAAIPPEK
101: NLRSNSIPPG VLQCNSTSGT FDAKLDTPGL AELPHALSSS IDSNGSDISA FLADVHAVSS APTLCSAFQN VSSFMEPVNL DAFGFQGAQN VAMLNKTSLP
201: NGNPSLFDNA AIASLHDSKE FLNGGSIPSF GTVLQALGAG GLKAAQQEQN IRNIPLPTFT SGSHLAVTDA QGPPLPSKIP PLIHDHNSEY PINHSSDVEP
301: QANSAPGNSA NAKPRTRARR GQATDPHSIA ERLRREKISE RMKNLQVLVP NSNKADKASM LDEIIDYVKF LQLQVKVLSM SRLGAPGAVL PLLRESQTEC
401: HSNPSLSAST ISQGPPDMPD SEDSSAFEQE VVKLMETSII SAMQYLQNKG LCLMPIALAS AISNQKGMAA AAAIPPEK
001: MNQQGQTQTQ TQPQASASTA TGGTVAAPPQ SRTKIRARRG QATDPHSIAE RLRRERIAER MKALQELVPN GNKTDKASML DEIIDYVKFL QLQVKVLSMS
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.